linkml-common

Common Data Model Elements

URI: https://w3id.org/linkml/linkml-common

Name: linkml-common

Classes

Class	Description
Agent	Represents an Agent
Any	None
CreationMetadata	None
Entity	A physical, digital, conceptual, or other kind of thing with some common characteristics
Event	A thing that happens
ClinicalCohortEnrollment	An event relating a patient to a clinical cohort
EngineeringProcess	None
ExecutionOfProcedure	None
PlannedProcess	A process that follows a defined procedure or plan
ComputationalPlannedProcess	Application of a mathematical operation to one or more inputs to produce one or more outputs
FoodPreparation	None
InvestigativeProcess	None
DataGenerationFromSample	None
SampleCollectionProcess	None
MaterialCollection	None
MaterialProcessing	None
EngineeringMaterialProcessing	None
FoodProcessing	None
SampleProcessing	None
HealthcareConditionOccurrence	None
HealthcareEncounter	An interaction between a patient and one or more healthcare providers
Investigation	None
LifeEvent	None
Observation	A statement about the state of something
Measurement	None
QualitativeObservation	None
Intangible	An entity that is not a physical object, process, or information
ComputationalModel	None
DigitalTwin	None
Simulation	None
ClimateModel	None
Concept	None
CurrencyConcept	A currency
ExtractiveIndustryProduct	A product extracted from an extractive industry facility
ExtractiveIndustryWaste	Waste material generated from extractive industry operations
FoodTypeConcept	None
BasicFoodType	None
CompositeFoodType	None
PowerPlantType	The type of power plant
QuantityKind	None
UnitConcept	None
DataStructure	None
EntitySet	A group of things. The collection may be heterogeneous or homogeneous.
InformationEntity	An entity that describes some information
ClinicalCohortDefinition	A definition of a clinical cohort
Dataset	None
OrgChart	None
Publication	None
Specification	A specification of a thing
Procedure	A canonical series of actions conducted in a certain order or manner
EngineeringSpecification	None
FoodRecipe	None
InvestigativeProtocol	None
StudyDesign	None
StudyHypothesis	None
StudyResult	None
PlannedProcessConfiguration	None
Prediction	None
AggregatePrediction	None
SimplePrediction	None
PredictionSummaryStatistics	A class for collecting totals of various outcomes.
Quantity	None
Duration	A length of time
FoodIngredient	None
Ratio	A tuple of two quantities
SimpleQuantity	A quantity is a property that can be measured or counted
MoneyQuantity	A quantity of money
QuantityRange	A quantity range is a property that can be measured or counted
Relationship	None
OrganismalRelationship	None
OrganizationPersonnelRelationship	None
PersonInRole	None
TemporalRelationship	A relationship to another time point
Role	None
HealthcareRole	None
HealthcareProvider	None
Patient	None
OrganizationalRole	None
Service	A service provided by an organization
FinancialProduct	A product or service offered by a bank whereby one may deposit, withdraw or transfer money and in some cases be paid interest.
FinancialAccount	A bank account
SetOfObservations	None
StructuredValue	A value that is a structured collection of other values
Location	None
GeoBoxLocation	None
PointLocation	None
GeoPointLocation	None
PostalAddress	Represents an Address
TimePointOrTemporalInterval	None
TemporalInterval	A period of time
TimePoint	A point in time. Can be fully specified, or specified in relative terms.
Variable	None
PhysicalEntity	None
AutomatedAgent	Represents an Automated Agent
BuiltEnvironmentFeature	None
BuiltSystem	None
ElectricalGrid	A network of electrical transmission lines
Facility	None
Building	None
PowerPlant	A facility for generating electrical power
FossilFuelPlant	A power plant that uses fossil fuels
NuclearPlant	A nuclear power plant
RenewablePlant	A power plant that uses renewable energy sources
HydroelectricPlant	A hydroelectric power plant
SolarPlant	A solar power plant
WindFarm	A wind farm
ExtractiveIndustryFacility	A facility where natural resources are extracted from the earth
MiningFacility	A facility where mineral resources are extracted from the earth
QuarryFacility	A facility where stone, sand, or gravel are extracted from the earth
WellFacility	A facility where fluid resources (e.g., oil, gas, water) are extracted from the earth
ClinicalCohort	A group of patients who share a common set of characteristics
CreativeWork	The most generic kind of creative work, including books, movies, photographs, software programs, etc.
Equipment	None
ExtractiveIndustryEquipment	The equipment used in extractive industry operations
IndividualOrganism	None
Person	Represents a Person
VeterinaryAnimal	None
Organization	Represents an Organization
FinancialOrganization	An organization that provides financial services
HealthcareOrganization	An organization that provides healthcare services
PhysicalDevice	None
PhysicalSystem	None
EconomicSystem	None
EnvironmentalSystem	None
Climate	None
Place	Entities that have a somewhat fixed, physical extension.
AstronomicalBody	None
EnvironmentalSite	A location or site that is the subject of environmental monitoring
HealthcareSite	None
Landform	A natural feature of the solid surface of the Earth or other planetary body
RawMaterial	None
SampleMaterial	None
SubjectHistory	None
SubjectObservationHistory	None
ClinicalHistory	None
Identified	None
Model	None
OutcomeStatistics	A class for collecting totals of various outcomes.
Typed	None

Slots

Slot	Description
abstract	A summary of the item
account_holder	The person or organization that holds the account
account_number	The account number
accuracy	Accuracy is calculated as (TP + TN) / (TP + FP + TN + FN)
address
age_in_years	Number of years since birth
allowed_units	The units that are allowed for this variable
altitude	The altitude of the location
annual_production
area
bank	The bank that holds the account
birth_date	Date on which a person is born
bounding_coordinates	The bounding coordinates of the place
capacity
capex	Capital expenditure for the plant
care_site
city	The city
classification	A precise classification of the thing, using a concept from an ontology, cont...
cohort
collected_as_part_of
collected_from
commissioning_date
components
contacts	A contact point for a person or organization
contributors	A person or organization that contributed to the creation of the work
country	The country
creators	The person or organization who created the work
dam	The dam used by the hydroelectric plant
date_value
datetime_value
decommissioning_date
definition
denominator	The denominator of the ratio
depth
describes	The thing that is being described
description	A human-readable description for a thing
design
east_bounding_coordinate	The easternmost coordinate of the location
economy_of_place
ends_at
events
expected_value
f1_score	F1 Score is the harmonic mean of precision and recall
facility_type
false_negative_count	Total number of false negatives (FN)
false_positive_count	Total number of false positives (FP)
follows_procedure
for_organization
fuel
geolocation	The geolocation of the place
grade
happens_at
has_duration
has_interval
has_person_roles
has_quantity_kind	The kind of quantity
hypothesis
id	A unique identifier for a thing
immediate_preceding_steps	The steps that immediately precede this step
ingredients
inputs	The inputs to the operation
interpretations
is_ongoing_as_of
is_person
keywords	Keywords or tags used to describe this item
latitude	The latitude of the location
located_at_place	The place where the entity is located
location
longitude	The longitude of the location
lower_bound	The lower bound of the range
marker_event
material_collected
measured_using
measurements
members	The members of the collection
mining_method
models
name	A human-readable name for a thing
north_bounding_coordinate	The northernmost coordinate of the location
numerator	The numerator of the ratio
object	The object of a relationship
objectives
observation_subject
observations
observed_during
ontology_types	A collection of concepts that help to classify the thing, using concepts from...
operator
opex	Operating expense for the plant
outcome
outputs	The outputs of the operation
over_interval
part_of
parts	The parts of the process
patient
person_role
plant_type
plants
postal_code	The postal code or zip code
precision	Precision is calculated as TP / (TP + FP)
predicate
predicted_value
predictions
primary_email	The main email address of a person
processing_method
product_type
production_capacity
products
protocols_io_url
provider
provides_services
quantity_measured	The quantity being measured
recall	Recall is calculated as TP / (TP + FN)
relationships
relative_to
reserves
result
results
rights	Information about rights held in and over the item
south_bounding_coordinate	The southernmost coordinate of the location
speciality
starts_at
state	The state
steps
street_address	The street address
street_address_additional
subject	The subject of a relationship
subject_person
time_value
title	The title of the item
true_negative_count	Total number of true negatives (TN)
true_positive_count	Total number of true positives (TP)
type	A type for a thing
unit	The currency of the quantity
upper_bound	The upper bound of the range
uses_configuration
uses_dataset
uses_physical_device
value	The value of the quantity
variable_measured	The variable being measured
variable_predicted
variables
vital_status	living or dead status
well_type
west_bounding_coordinate	The westernmost coordinate of the location
year_value

Enumerations

Enumeration	Description
CaseOrControlEnum
ExtractiveIndustryFacilityType
ExtractiveIndustryProductType
FinanicialOrganizationEnum
FossilFuelType
HealthcareEncounterClassification
HumanLanguageCodeEnum	An enumeration of languages
InvestigativeProtocolEnum
LandformEnum
MiningMethod
OrganismTaxonEnum
OrganizationPersonnelRelationshipEnum
OutcomeType
PersonStatus
RelativeTimeEnum
SampleProcessingEnum
StudyDesignEnum
WellType

Types

Type	Description
Boolean	A binary (true or false) value
CountScalar
Curie	a compact URI
Date	a date (year, month and day) in an idealized calendar
DateOrDatetime	Either a date or a datetime
Datetime	The combination of a date and time
Decimal	A real number with arbitrary precision that conforms to the xsd:decimal speci...
Double	A real number that conforms to the xsd:double specification
Float	A real number that conforms to the xsd:float specification
Integer	An integer
Jsonpath	A string encoding a JSON Path
Jsonpointer	A string encoding a JSON Pointer
Ncname	Prefix part of CURIE
Nodeidentifier	A URI, CURIE or BNODE that represents a node in a model
Objectidentifier	A URI or CURIE that represents an object in the model
Sparqlpath	A string encoding a SPARQL Property Path
String	A character string
Time	A time object represents a (local) time of day, independent of any particular...
Uri	a complete URI
Uriorcurie	a URI or a CURIE

Subsets

Subset	Description