Class: SampleCollectionProcess
URI: linkml_common:SampleCollectionProcess
classDiagram
class SampleCollectionProcess
InvestigativeProcess <|-- SampleCollectionProcess
SampleCollectionProcess : classification
SampleCollectionProcess --> Concept : classification
SampleCollectionProcess : collected_from
SampleCollectionProcess --> NamedThing : collected_from
SampleCollectionProcess : description
SampleCollectionProcess : ends_at
SampleCollectionProcess --> TimePoint : ends_at
SampleCollectionProcess : follows_procedure
SampleCollectionProcess --> InvestigativeProtocol : follows_procedure
SampleCollectionProcess : happens_at
SampleCollectionProcess --> TimePoint : happens_at
SampleCollectionProcess : has_duration
SampleCollectionProcess --> Duration : has_duration
SampleCollectionProcess : has_interval
SampleCollectionProcess --> TemporalInterval : has_interval
SampleCollectionProcess : id
SampleCollectionProcess : material_collected
SampleCollectionProcess --> SampleMaterial : material_collected
SampleCollectionProcess : name
SampleCollectionProcess : ontology_types
SampleCollectionProcess --> Concept : ontology_types
SampleCollectionProcess : part_of
SampleCollectionProcess --> Investigation : part_of
SampleCollectionProcess : starts_at
SampleCollectionProcess --> TimePoint : starts_at
SampleCollectionProcess : type
SampleCollectionProcess : uses_physical_device
SampleCollectionProcess --> PhysicalDevice : uses_physical_device
Inheritance
- Entity
- NamedThing
- Event
- PlannedProcess
- InvestigativeProcess
- SampleCollectionProcess
- InvestigativeProcess
- PlannedProcess
- Event
- NamedThing
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
material_collected | 0..1 SampleMaterial |
direct | |
collected_from | 0..1 NamedThing |
direct | |
follows_procedure | 0..1 InvestigativeProtocol |
PlannedProcess, InvestigativeProcess | |
part_of | 0..1 Investigation |
InvestigativeProcess | |
uses_physical_device | 0..1 PhysicalDevice |
PlannedProcess | |
starts_at | 0..1 TimePoint |
Event | |
ends_at | 0..1 TimePoint |
Event | |
happens_at | 0..1 TimePoint |
Event | |
has_interval | 0..1 TemporalInterval |
Event | |
has_duration | 0..1 Duration |
Event | |
id | 1..1 Uriorcurie |
A unique identifier for a thing | NamedThing |
name | 0..1 String |
A human-readable name for a thing | NamedThing |
type | 0..1 String |
A type for a thing | Entity, NamedThing |
classification | 0..1 Concept |
A precise classification of the thing, using a concept from an ontology, cont... | NamedThing |
ontology_types | 0..* Concept |
NamedThing | |
description | 0..1 String |
A human-readable description for a thing | NamedThing |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/linkml/linkml-common
Mappings
Mapping Type | Mapped Value |
---|---|
self | linkml_common:SampleCollectionProcess |
native | linkml_common:SampleCollectionProcess |
exact | nmdcschema:CollectingBiosamplesFromSite |
LinkML Source
Direct
name: SampleCollectionProcess
from_schema: https://w3id.org/linkml/linkml-common
exact_mappings:
- nmdcschema:CollectingBiosamplesFromSite
is_a: InvestigativeProcess
attributes:
material_collected:
name: material_collected
from_schema: https://w3id.org/linkml-common/investigations
rank: 1000
domain_of:
- SampleCollectionProcess
range: SampleMaterial
collected_from:
name: collected_from
from_schema: https://w3id.org/linkml-common/investigations
rank: 1000
domain_of:
- SampleCollectionProcess
range: NamedThing
Induced
name: SampleCollectionProcess
from_schema: https://w3id.org/linkml/linkml-common
exact_mappings:
- nmdcschema:CollectingBiosamplesFromSite
is_a: InvestigativeProcess
attributes:
material_collected:
name: material_collected
from_schema: https://w3id.org/linkml-common/investigations
rank: 1000
alias: material_collected
owner: SampleCollectionProcess
domain_of:
- SampleCollectionProcess
range: SampleMaterial
collected_from:
name: collected_from
from_schema: https://w3id.org/linkml-common/investigations
rank: 1000
alias: collected_from
owner: SampleCollectionProcess
domain_of:
- SampleCollectionProcess
range: NamedThing
follows_procedure:
name: follows_procedure
from_schema: https://w3id.org/linkml-common/investigations
rank: 1000
alias: follows_procedure
owner: SampleCollectionProcess
domain_of:
- InvestigativeProcess
- EngineeringProcess
- PlannedProcess
range: InvestigativeProtocol
part_of:
name: part_of
from_schema: https://w3id.org/linkml-common/investigations
rank: 1000
alias: part_of
owner: SampleCollectionProcess
domain_of:
- InvestigativeProcess
- EngineeringProcess
range: Investigation
uses_physical_device:
name: uses_physical_device
from_schema: https://w3id.org/linkml-common/plannedprocess
rank: 1000
alias: uses_physical_device
owner: SampleCollectionProcess
domain_of:
- PlannedProcess
range: PhysicalDevice
starts_at:
name: starts_at
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
alias: starts_at
owner: SampleCollectionProcess
domain_of:
- Event
- TimePointOrTemporalInterval
- TemporalInterval
range: TimePoint
ends_at:
name: ends_at
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
alias: ends_at
owner: SampleCollectionProcess
domain_of:
- Event
- TimePointOrTemporalInterval
- TemporalInterval
range: TimePoint
happens_at:
name: happens_at
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
alias: happens_at
owner: SampleCollectionProcess
domain_of:
- Event
range: TimePoint
has_interval:
name: has_interval
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
alias: has_interval
owner: SampleCollectionProcess
domain_of:
- Event
range: TemporalInterval
has_duration:
name: has_duration
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
alias: has_duration
owner: SampleCollectionProcess
domain_of:
- Event
range: Duration
id:
name: id
description: A unique identifier for a thing
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
slot_uri: schema:identifier
identifier: true
alias: id
owner: SampleCollectionProcess
domain_of:
- NamedThing
range: uriorcurie
required: true
name:
name: name
description: A human-readable name for a thing
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
slot_uri: schema:name
alias: name
owner: SampleCollectionProcess
domain_of:
- NamedThing
range: string
type:
name: type
description: A type for a thing. The range of this should be a class within the
schema. It is intended for schema-based classification. Anything beneath the
shoreline of the schema should use `classification`.
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
designates_type: true
alias: type
owner: SampleCollectionProcess
domain_of:
- Entity
- NamedThing
range: string
classification:
name: classification
description: A precise classification of the thing, using a concept from an ontology,
controlled vocabulary, thesaurus, or taxonomy. Some schema classes may choose
to restrict the range of values which this slot can take, using `values_from`,
or bindings.
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
alias: classification
owner: SampleCollectionProcess
domain_of:
- NamedThing
range: Concept
ontology_types:
name: ontology_types
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
multivalued: true
alias: ontology_types
owner: SampleCollectionProcess
domain_of:
- NamedThing
range: Concept
description:
name: description
description: A human-readable description for a thing
from_schema: https://w3id.org/linkml/linkml-common
rank: 1000
slot_uri: schema:description
alias: description
owner: SampleCollectionProcess
domain_of:
- NamedThing
- TimePoint
range: string