Class: TypeDefinition

name: type_definition
description: an element that whose instances are atomic scalar values that can be
  mapped to primitive types
in_subset:
- SpecificationSubset
- BasicSubset
- OwlProfile
from_schema: https://w3id.org/linkml/meta
rank: 4
is_a: element
mixins:
- type_expression
slots:
- typeof
- base
- type_uri
- repr
- union_of
slot_usage:
  union_of:
    name: union_of
    domain_of:
    - type_definition
    - slot_definition
    - class_definition
    - type_definition
    - slot_definition
    - class_definition
    range: type_definition

name: type_definition
description: an element that whose instances are atomic scalar values that can be
  mapped to primitive types
in_subset:
- SpecificationSubset
- BasicSubset
- OwlProfile
from_schema: https://w3id.org/linkml/meta
rank: 4
is_a: element
mixins:
- type_expression
slot_usage:
  union_of:
    name: union_of
    domain_of:
    - type_definition
    - slot_definition
    - class_definition
    - type_definition
    - slot_definition
    - class_definition
    range: type_definition
attributes:
  typeof:
    name: typeof
    description: Names a parent type
    comments:
    - the target type definition of the typeof slot is referred to as the "parent
      type"
    - the type definition containing the typeof slot is referred to as the "child
      type"
    - type definitions without a typeof slot are referred to as a "root type"
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 7
    domain: type_definition
    alias: typeof
    owner: type_definition
    domain_of:
    - type_definition
    range: type_definition
  base:
    name: base
    description: python base type that implements this type definition
    comments:
    - every root type must have a base
    - the base is inherited by child types but may be overriden.  Base compatibility
      is not checked.
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 8
    domain: type_definition
    inherited: true
    alias: base
    owner: type_definition
    domain_of:
    - type_definition
    range: string
  type_uri:
    name: type_uri
    description: The uri that defines the possible values for the type definition
    comments:
    - uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)
    - every root type must have a type uri
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 2
    domain: type_definition
    inherited: true
    alias: uri
    owner: type_definition
    domain_of:
    - type_definition
    range: uriorcurie
  repr:
    name: repr
    description: the name of the python object that implements this type definition
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 10
    domain: type_definition
    inherited: true
    alias: repr
    owner: type_definition
    domain_of:
    - type_definition
    range: string
  union_of:
    name: union_of
    description: indicates that the domain element consists exactly of the members
      of the element in the range.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    multivalued: true
    alias: union_of
    owner: type_definition
    domain_of:
    - type_definition
    - slot_definition
    - class_definition
    - type_definition
    - slot_definition
    - class_definition
    range: type_definition
  pattern:
    name: pattern
    description: the string value of the slot must conform to this regular expression
      expressed in the string
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 35
    domain: definition
    inherited: true
    alias: pattern
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: string
  structured_pattern:
    name: structured_pattern
    description: the string value of the slot must conform to the regular expression
      in the pattern expression
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: definition
    inherited: true
    alias: structured_pattern
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: pattern_expression
  unit:
    name: unit
    description: an encoding of a unit
    from_schema: https://w3id.org/linkml/units
    rank: 1000
    slot_uri: qudt:unit
    alias: unit
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    - permissible_value
    range: UnitOfMeasure
  implicit_prefix:
    name: implicit_prefix
    description: Causes the slot value to be interpreted as a uriorcurie after prefixing
      with this string
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: slot_expression
    alias: implicit_prefix
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: string
  equals_string:
    name: equals_string
    description: the slot must have range string and the value of the slot must equal
      the specified value
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: list_value_specification_constant
    inherited: true
    alias: equals_string
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: string
  equals_string_in:
    name: equals_string_in
    description: the slot must have range string and the value of the slot must equal
      one of the specified values
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: list_value_specification_constant
    status: testing
    multivalued: true
    inherited: true
    alias: equals_string_in
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: string
  equals_number:
    name: equals_number
    description: the slot must have range of a number and the value of the slot must
      equal the specified value
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: list_value_specification_constant
    status: unstable
    inherited: true
    alias: equals_number
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: integer
  minimum_value:
    name: minimum_value
    description: for slots with ranges of type number, the value must be equal to
      or higher than this
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - low value
    rank: 1000
    domain: slot_definition
    inherited: true
    alias: minimum_value
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: integer
  maximum_value:
    name: maximum_value
    description: for slots with ranges of type number, the value must be equal to
      or lowe than this
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - high value
    rank: 1000
    domain: slot_definition
    inherited: true
    alias: maximum_value
    owner: type_definition
    domain_of:
    - type_expression
    - slot_expression
    range: integer
  none_of:
    name: none_of
    description: holds if none of the expressions hold
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - sh:not
    rank: 105
    is_a: boolean_slot
    multivalued: true
    alias: none_of
    owner: type_definition
    domain_of:
    - type_expression
    - path_expression
    - slot_expression
    - class_expression
    range: anonymous_type_expression
  exactly_one_of:
    name: exactly_one_of
    description: holds if only one of the expressions hold
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - sh:xone
    rank: 103
    is_a: boolean_slot
    multivalued: true
    alias: exactly_one_of
    owner: type_definition
    domain_of:
    - type_expression
    - path_expression
    - slot_expression
    - class_expression
    range: anonymous_type_expression
  any_of:
    name: any_of
    description: holds if at least one of the expressions hold
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - sh:or
    rank: 101
    is_a: boolean_slot
    multivalued: true
    alias: any_of
    owner: type_definition
    domain_of:
    - type_expression
    - path_expression
    - slot_expression
    - class_expression
    range: anonymous_type_expression
  all_of:
    name: all_of
    description: holds if all of the expressions hold
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - sh:and
    rank: 107
    is_a: boolean_slot
    multivalued: true
    alias: all_of
    owner: type_definition
    domain_of:
    - type_expression
    - path_expression
    - slot_expression
    - class_expression
    range: anonymous_type_expression
  name:
    name: name
    description: the unique name of the element within the context of the schema.  Name
      is combined with the default prefix to form the globally unique subject of the
      target class.
    in_subset:
    - SpecificationSubset
    - OwlProfile
    - MinimalSubset
    - BasicSubset
    - RelationalModelProfile
    - ObjectOrientedProfile
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - https://en.wikipedia.org/wiki/Data_element_name
    aliases:
    - short name
    - unique name
    exact_mappings:
    - schema:name
    rank: 1
    domain: element
    slot_uri: rdfs:label
    identifier: true
    alias: name
    owner: type_definition
    domain_of:
    - element
    range: string
  id_prefixes:
    name: id_prefixes
    description: the identifier of this class or slot must begin with the URIs referenced
      by this prefix
    comments:
    - Order of elements may be used to indicate priority order
    - If identifiers are treated as CURIEs, then the CURIE must start with one of
      the indicated prefixes followed by `:` (_should_ start if the list is open)
    - If identifiers are treated as URIs, then the URI string must start with the
      expanded for of the prefix (_should_ start if the list is open)
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - https://github.com/linkml/linkml/issues/194
    - https://github.com/linkml/linkml-model/issues/28
    rank: 1000
    domain: element
    multivalued: true
    alias: id_prefixes
    owner: type_definition
    domain_of:
    - element
    range: ncname
  definition_uri:
    name: definition_uri
    description: the "native" URI of the element
    comments:
    - Formed by combining the default_prefix with the mangled element
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    readonly: filled in by the schema loader
    alias: definition_uri
    owner: type_definition
    domain_of:
    - element
    range: uriorcurie
  local_names:
    name: local_names
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    multivalued: true
    alias: local_names
    owner: type_definition
    domain_of:
    - element
    range: local_name
    inlined: true
  conforms_to:
    name: conforms_to
    description: An established standard to which the element conforms.
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: dcterms:conformsTo
    alias: conforms_to
    owner: type_definition
    domain_of:
    - element
    range: string
  extensions:
    name: extensions
    description: a tag/text tuple attached to an arbitrary element
    from_schema: https://w3id.org/linkml/extensions
    rank: 1000
    domain: extensible
    multivalued: true
    alias: extensions
    owner: type_definition
    domain_of:
    - extension
    - extensible
    range: extension
    inlined: true
  annotations:
    name: annotations
    description: a collection of tag/text tuples with the semantics of OWL Annotation
    from_schema: https://w3id.org/linkml/annotations
    rank: 1000
    is_a: extensions
    domain: annotatable
    multivalued: true
    alias: annotations
    owner: type_definition
    domain_of:
    - annotatable
    - annotation
    range: annotation
    inlined: true
  description:
    name: description
    description: a description of the element's purpose and use
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - definition
    exact_mappings:
    - dcterms:description
    - schema:description
    rank: 5
    domain: element
    slot_uri: skos:definition
    alias: description
    owner: type_definition
    domain_of:
    - common_metadata
    - permissible_value
    range: string
    recommended: true
  alt_descriptions:
    name: alt_descriptions
    description: A sourced alternative description for an element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - alternate definitions
    rank: 1000
    domain: element
    multivalued: true
    alias: alt_descriptions
    owner: type_definition
    domain_of:
    - common_metadata
    range: alt_description
    inlined: true
  title:
    name: title
    description: the official title of the element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - long name
    rank: 3
    domain: element
    slot_uri: dcterms:title
    alias: title
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  deprecated:
    name: deprecated
    description: Description of why and when this element will no longer be used
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    close_mappings:
    - owl:deprecated
    rank: 1000
    domain: element
    alias: deprecated
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  todos:
    name: todos
    description: Outstanding issue that needs resolution
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    multivalued: true
    alias: todos
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  notes:
    name: notes
    description: editorial notes about an element intended for internal consumption
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: skos:editorialNote
    multivalued: true
    alias: notes
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  comments:
    name: comments
    description: notes and comments about an element intended for external consumption
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - rdfs:comment
    rank: 1000
    domain: element
    slot_uri: skos:note
    multivalued: true
    alias: comments
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  examples:
    name: examples
    description: example usages of an element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    close_mappings:
    - vann:example
    rank: 1000
    singular_name: example
    domain: element
    multivalued: true
    alias: examples
    owner: type_definition
    domain_of:
    - common_metadata
    range: example
    inlined: true
  in_subset:
    name: in_subset
    description: used to indicate membership of a term in a defined subset of terms
      used for a particular domain or application (e.g. the translator_minimal subset
      holding the minimal set of predicates used in a translator knowledge graph)
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: OIO:inSubset
    multivalued: true
    alias: in_subset
    owner: type_definition
    domain_of:
    - common_metadata
    range: subset_definition
  from_schema:
    name: from_schema
    description: id of the schema that defined the element
    notes:
    - A stronger model would be range schema_definition, but this doesn't address
      the import model
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: skos:inScheme
    readonly: supplied by the schema loader
    alias: from_schema
    owner: type_definition
    domain_of:
    - common_metadata
    range: uri
  imported_from:
    name: imported_from
    description: the imports entry that this element was derived from.  Empty means
      primary source
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    readonly: supplied by the schema loader
    alias: imported_from
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  source:
    name: source
    description: A related resource from which the element is derived.
    comments:
    - The described resource may be derived from the related resource in whole or
      in part
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - origin
    - derived from
    close_mappings:
    - prov:wasDerivedFrom
    - schema:isBasedOn
    rank: 1000
    domain: element
    slot_uri: dcterms:source
    alias: source
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  in_language:
    name: in_language
    notes:
    - Use a string from IETF BCP 47
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    slot_uri: schema:inLanguage
    alias: in_language
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  see_also:
    name: see_also
    description: a reference
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: rdfs:seeAlso
    multivalued: true
    alias: see_also
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  deprecated element has exact replacement:
    name: deprecated element has exact replacement
    description: When an element is deprecated, it can be automatically replaced by
      this uri or curie
    from_schema: https://w3id.org/linkml/mappings
    mappings:
    - IAO:0100001
    rank: 1000
    alias: deprecated_element_has_exact_replacement
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  deprecated element has possible replacement:
    name: deprecated element has possible replacement
    description: When an element is deprecated, it can be potentially replaced by
      this uri or curie
    from_schema: https://w3id.org/linkml/mappings
    mappings:
    - OIO:consider
    rank: 1000
    alias: deprecated_element_has_possible_replacement
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  aliases:
    name: aliases
    description: Alaternate names for the element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - synonyms
    - alternate names
    - alternative labels
    - designations
    exact_mappings:
    - schema:alternateName
    rank: 1000
    domain: element
    slot_uri: skos:altLabel
    multivalued: true
    alias: aliases
    owner: type_definition
    domain_of:
    - common_metadata
    range: string
  structured_aliases:
    name: structured_aliases
    description: A list of structured_alias objects.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    slot_uri: skosxl:altLabel
    multivalued: true
    alias: structured_aliases
    owner: type_definition
    domain_of:
    - common_metadata
    range: structured_alias
    inlined: true
  mappings:
    name: mappings
    description: A list of terms from different schemas or terminology systems that
      have comparable meaning. These may include terms that are precisely equivalent,
      broader or narrower in meaning, or otherwise semantically related but not equivalent
      from a strict ontological perspective.
    from_schema: https://w3id.org/linkml/mappings
    aliases:
    - xrefs
    - identifiers
    - alternate identifiers
    - alternate ids
    rank: 1000
    slot_uri: skos:mappingRelation
    multivalued: true
    alias: mappings
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  exact mappings:
    name: exact mappings
    description: A list of terms from different schemas or terminology systems that
      have identical meaning.
    from_schema: https://w3id.org/linkml/mappings
    rank: 1000
    is_a: mappings
    slot_uri: skos:exactMatch
    multivalued: true
    inherited: false
    alias: exact_mappings
    owner: type_definition
    domain_of:
    - common_metadata
    - UnitOfMeasure
    range: uriorcurie
  close mappings:
    name: close mappings
    description: A list of terms from different schemas or terminology systems that
      have close meaning.
    from_schema: https://w3id.org/linkml/mappings
    rank: 1000
    is_a: mappings
    slot_uri: skos:closeMatch
    multivalued: true
    inherited: false
    alias: close_mappings
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  related mappings:
    name: related mappings
    description: A list of terms from different schemas or terminology systems that
      have related meaning.
    from_schema: https://w3id.org/linkml/mappings
    rank: 1000
    is_a: mappings
    slot_uri: skos:relatedMatch
    multivalued: true
    inherited: false
    alias: related_mappings
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  narrow mappings:
    name: narrow mappings
    description: A list of terms from different schemas or terminology systems that
      have narrower meaning.
    from_schema: https://w3id.org/linkml/mappings
    rank: 1000
    is_a: mappings
    slot_uri: skos:narrowMatch
    multivalued: true
    inherited: false
    alias: narrow_mappings
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  broad mappings:
    name: broad mappings
    description: A list of terms from different schemas or terminology systems that
      have broader meaning.
    from_schema: https://w3id.org/linkml/mappings
    rank: 1000
    is_a: mappings
    slot_uri: skos:broadMatch
    multivalued: true
    inherited: false
    alias: broad_mappings
    owner: type_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  rank:
    name: rank
    description: the relative order in which the element occurs, lower values are
      given precedence
    comments:
    - the rank of an element does not affect the semantics
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - order
    - precedence
    - display order
    exact_mappings:
    - qudt:order
    - qb:order
    rank: 51
    slot_uri: sh:order
    alias: rank
    owner: type_definition
    domain_of:
    - common_metadata
    - class_rule
    range: integer