Class: AnonymousSlotExpression
URI: linkml:AnonymousSlotExpression
classDiagram
class AnonymousSlotExpression
SlotExpression <|-- AnonymousSlotExpression
AnonymousExpression <|-- AnonymousSlotExpression
AnonymousSlotExpression : aliases
AnonymousSlotExpression : all_members
AnonymousSlotExpression --> anonymous_slot_expression : all_members
AnonymousSlotExpression : all_of
AnonymousSlotExpression --> anonymous_slot_expression : all_of
AnonymousSlotExpression : alt_descriptions
AnonymousSlotExpression --> alt_description : alt_descriptions
AnonymousSlotExpression : annotations
AnonymousSlotExpression --> annotation : annotations
AnonymousSlotExpression : any_of
AnonymousSlotExpression --> anonymous_slot_expression : any_of
AnonymousSlotExpression : bindings
AnonymousSlotExpression --> enum_binding : bindings
AnonymousSlotExpression : broad_mappings
AnonymousSlotExpression : categories
AnonymousSlotExpression : close_mappings
AnonymousSlotExpression : comments
AnonymousSlotExpression : contributors
AnonymousSlotExpression : created_by
AnonymousSlotExpression : created_on
AnonymousSlotExpression : deprecated
AnonymousSlotExpression : deprecated_element_has_exact_replacement
AnonymousSlotExpression : deprecated_element_has_possible_replacement
AnonymousSlotExpression : description
AnonymousSlotExpression : enum_range
AnonymousSlotExpression --> enum_expression : enum_range
AnonymousSlotExpression : equals_expression
AnonymousSlotExpression : equals_number
AnonymousSlotExpression : equals_string
AnonymousSlotExpression : equals_string_in
AnonymousSlotExpression : exact_mappings
AnonymousSlotExpression : exact_cardinality
AnonymousSlotExpression : exactly_one_of
AnonymousSlotExpression --> anonymous_slot_expression : exactly_one_of
AnonymousSlotExpression : examples
AnonymousSlotExpression --> example : examples
AnonymousSlotExpression : extensions
AnonymousSlotExpression --> extension : extensions
AnonymousSlotExpression : from_schema
AnonymousSlotExpression : has_member
AnonymousSlotExpression --> anonymous_slot_expression : has_member
AnonymousSlotExpression : implicit_prefix
AnonymousSlotExpression : imported_from
AnonymousSlotExpression : in_language
AnonymousSlotExpression : in_subset
AnonymousSlotExpression --> subset_definition : in_subset
AnonymousSlotExpression : inlined
AnonymousSlotExpression : inlined_as_list
AnonymousSlotExpression : keywords
AnonymousSlotExpression : last_updated_on
AnonymousSlotExpression : mappings
AnonymousSlotExpression : maximum_cardinality
AnonymousSlotExpression : maximum_value
AnonymousSlotExpression --> Anything : maximum_value
AnonymousSlotExpression : minimum_cardinality
AnonymousSlotExpression : minimum_value
AnonymousSlotExpression --> Anything : minimum_value
AnonymousSlotExpression : modified_by
AnonymousSlotExpression : multivalued
AnonymousSlotExpression : narrow_mappings
AnonymousSlotExpression : none_of
AnonymousSlotExpression --> anonymous_slot_expression : none_of
AnonymousSlotExpression : notes
AnonymousSlotExpression : pattern
AnonymousSlotExpression : range
AnonymousSlotExpression --> element : range
AnonymousSlotExpression : range_expression
AnonymousSlotExpression --> anonymous_class_expression : range_expression
AnonymousSlotExpression : rank
AnonymousSlotExpression : recommended
AnonymousSlotExpression : related_mappings
AnonymousSlotExpression : required
AnonymousSlotExpression : see_also
AnonymousSlotExpression : source
AnonymousSlotExpression : status
AnonymousSlotExpression : structured_aliases
AnonymousSlotExpression --> structured_alias : structured_aliases
AnonymousSlotExpression : structured_pattern
AnonymousSlotExpression --> pattern_expression : structured_pattern
AnonymousSlotExpression : title
AnonymousSlotExpression : todos
AnonymousSlotExpression : unit
AnonymousSlotExpression --> UnitOfMeasure : unit
AnonymousSlotExpression : value_presence
AnonymousSlotExpression --> presence_enum : value_presence
Inheritance
- AnonymousExpression [ Expression Extensible Annotatable CommonMetadata]
- AnonymousSlotExpression [ SlotExpression]
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
range | 0..1 Element |
defines the type of the object of the slot | SlotExpression |
range_expression | 0..1 AnonymousClassExpression |
A range that is described as a boolean expression combining existing ranges | SlotExpression |
enum_range | 0..1 EnumExpression |
An inlined enumeration | SlotExpression |
bindings | 0..* EnumBinding |
A collection of enum bindings that specify how a slot can be bound to a permi... | SlotExpression |
required | 0..1 Boolean |
true means that the slot must be present in instances of the class definition | SlotExpression |
recommended | 0..1 Boolean |
true means that the slot should be present in instances of the class definiti... | SlotExpression |
multivalued | 0..1 Boolean |
true means that slot can have more than one value and should be represented u... | SlotExpression |
inlined | 0..1 Boolean |
True means that keyed or identified slot appears in an outer structure by val... | SlotExpression |
inlined_as_list | 0..1 Boolean |
True means that an inlined slot is represented as a list of range instances | SlotExpression |
minimum_value | 0..1 Anything |
For ordinal ranges, the value must be equal to or higher than this | SlotExpression |
maximum_value | 0..1 Anything |
For ordinal ranges, the value must be equal to or lower than this | SlotExpression |
pattern | 0..1 String |
the string value of the slot must conform to this regular expression expresse... | SlotExpression |
structured_pattern | 0..1 PatternExpression |
the string value of the slot must conform to the regular expression in the pa... | SlotExpression |
unit | 0..1 UnitOfMeasure |
an encoding of a unit | SlotExpression |
implicit_prefix | 0..1 String |
Causes the slot value to be interpreted as a uriorcurie after prefixing with ... | SlotExpression |
value_presence | 0..1 PresenceEnum |
if PRESENT then a value must be present (for lists there must be at least one... | SlotExpression |
equals_string | 0..1 String |
the slot must have range string and the value of the slot must equal the spec... | SlotExpression |
equals_string_in | 0..* String |
the slot must have range string and the value of the slot must equal one of t... | SlotExpression |
equals_number | 0..1 Integer |
the slot must have range of a number and the value of the slot must equal the... | SlotExpression |
equals_expression | 0..1 String |
the value of the slot must equal the value of the evaluated expression | SlotExpression |
exact_cardinality | 0..1 Integer |
the exact number of entries for a multivalued slot | SlotExpression |
minimum_cardinality | 0..1 Integer |
the minimum number of entries for a multivalued slot | SlotExpression |
maximum_cardinality | 0..1 Integer |
the maximum number of entries for a multivalued slot | SlotExpression |
has_member | 0..1 AnonymousSlotExpression |
the value of the slot is multivalued with at least one member satisfying the ... | SlotExpression |
all_members | 0..1 AnonymousSlotExpression |
the value of the slot is multivalued with all members satisfying the conditio... | SlotExpression |
none_of | 0..* AnonymousSlotExpression |
holds if none of the expressions hold | SlotExpression |
exactly_one_of | 0..* AnonymousSlotExpression |
holds if only one of the expressions hold | SlotExpression |
any_of | 0..* AnonymousSlotExpression |
holds if at least one of the expressions hold | SlotExpression |
all_of | 0..* AnonymousSlotExpression |
holds if all of the expressions hold | SlotExpression |
extensions | 0..* Extension |
a tag/text tuple attached to an arbitrary element | Extensible |
annotations | 0..* Annotation |
a collection of tag/text tuples with the semantics of OWL Annotation | Annotatable |
description | 0..1 recommended String |
a textual description of the element's purpose and use | CommonMetadata |
alt_descriptions | 0..* AltDescription |
A sourced alternative description for an element | CommonMetadata |
title | 0..1 String |
A concise human-readable display label for the element | CommonMetadata |
deprecated | 0..1 String |
Description of why and when this element will no longer be used | CommonMetadata |
todos | 0..* String |
Outstanding issues that needs resolution | CommonMetadata |
notes | 0..* String |
editorial notes about an element intended primarily for internal consumption | CommonMetadata |
comments | 0..* String |
notes and comments about an element intended primarily for external consumpti... | CommonMetadata |
examples | 0..* Example |
example usages of an element | CommonMetadata |
in_subset | 0..* SubsetDefinition |
used to indicate membership of a term in a defined subset of terms used for a... | CommonMetadata |
from_schema | 0..1 Uri |
id of the schema that defined the element | CommonMetadata |
imported_from | 0..1 String |
the imports entry that this element was derived from | CommonMetadata |
source | 0..1 Uriorcurie |
A related resource from which the element is derived | CommonMetadata |
in_language | 0..1 String |
the primary language used in the sources | CommonMetadata |
see_also | 0..* Uriorcurie |
A list of related entities or URLs that may be of relevance | CommonMetadata |
deprecated_element_has_exact_replacement | 0..1 Uriorcurie |
When an element is deprecated, it can be automatically replaced by this uri o... | CommonMetadata |
deprecated_element_has_possible_replacement | 0..1 Uriorcurie |
When an element is deprecated, it can be potentially replaced by this uri or ... | CommonMetadata |
aliases | 0..* String |
Alternate names/labels for the element | CommonMetadata |
structured_aliases | 0..* StructuredAlias |
A list of structured_alias objects, used to provide aliases in conjunction wi... | CommonMetadata |
mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have compa... | CommonMetadata |
exact_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have ident... | CommonMetadata |
close_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have close... | CommonMetadata |
related_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have relat... | CommonMetadata |
narrow_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have narro... | CommonMetadata |
broad_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have broad... | CommonMetadata |
created_by | 0..1 Uriorcurie |
agent that created the element | CommonMetadata |
contributors | 0..* Uriorcurie |
agent that contributed to the element | CommonMetadata |
created_on | 0..1 Datetime |
time at which the element was created | CommonMetadata |
last_updated_on | 0..1 Datetime |
time at which the element was last updated | CommonMetadata |
modified_by | 0..1 Uriorcurie |
agent that modified the element | CommonMetadata |
status | 0..1 Uriorcurie |
status of the element | CommonMetadata |
rank | 0..1 Integer |
the relative order in which the element occurs, lower values are given preced... | CommonMetadata |
categories | 0..* Uriorcurie |
Controlled terms used to categorize an element | CommonMetadata |
keywords | 0..* String |
Keywords or tags used to describe the element | CommonMetadata |
Usages
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/linkml/meta
Mappings
Mapping Type | Mapped Value |
---|---|
self | linkml:AnonymousSlotExpression |
native | linkml:AnonymousSlotExpression |
LinkML Source
Direct
name: anonymous_slot_expression
from_schema: https://w3id.org/linkml/meta
is_a: anonymous_expression
mixins:
- slot_expression
Induced
name: anonymous_slot_expression
from_schema: https://w3id.org/linkml/meta
is_a: anonymous_expression
mixins:
- slot_expression
attributes:
range:
name: range
description: "defines the type of the object of the slot. Given the following\
\ slot definition\n S1:\n domain: C1\n range: C2\nthe declaration\n\
\ X:\n S1: Y\n\nimplicitly asserts Y is an instance of C2\n"
comments:
- range is underspecified, as not all elements can appear as the range of a slot.
in_subset:
- SpecificationSubset
- MinimalSubset
- BasicSubset
- RelationalModelProfile
- ObjectOrientedProfile
from_schema: https://w3id.org/linkml/meta
aliases:
- value domain
rank: 1000
domain: slot_definition
inherited: true
ifabsent: default_range
alias: range
owner: anonymous_slot_expression
domain_of:
- enum_binding
- slot_expression
range: element
range_expression:
name: range_expression
description: A range that is described as a boolean expression combining existing
ranges
comments:
- one use for this is being able to describe a range using any_of expressions,
for example to combine two enums
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
domain: slot_expression
alias: range_expression
owner: anonymous_slot_expression
domain_of:
- path_expression
- slot_expression
range: anonymous_class_expression
enum_range:
name: enum_range
description: An inlined enumeration
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
alias: enum_range
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: enum_expression
bindings:
name: bindings
description: 'A collection of enum bindings that specify how a slot can be bound
to a permissible value from an enumeration.
LinkML provides enums to allow string values to be restricted to one of a set
of permissible values (specified statically or dynamically).
Enum bindings allow enums to be bound to any object, including complex nested
objects. For example, given a (generic) class Concept with slots id and label,
it may be desirable to restrict the values the id takes on in a given context.
For example, a HumanSample class may have a slot for representing sample site,
with a range of concept, but the values of that slot may be restricted to concepts
from a particular branch of an anatomy ontology.'
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
domain: element
multivalued: true
alias: bindings
owner: anonymous_slot_expression
domain_of:
- schema_definition
- slot_expression
range: enum_binding
inlined: true
required:
name: required
description: true means that the slot must be present in instances of the class
definition
in_subset:
- SpecificationSubset
- MinimalSubset
- BasicSubset
- RelationalModelProfile
- ObjectOrientedProfile
from_schema: https://w3id.org/linkml/meta
rank: 8
domain: slot_definition
inherited: true
alias: required
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: boolean
recommended:
name: recommended
description: true means that the slot should be present in instances of the class
definition, but this is not required
comments:
- This is to be used where not all data is expected to conform to having a required
field
- If a slot is recommended, and it is not populated, applications must not treat
this as an error. Applications may use this to inform the user of missing data
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://github.com/linkml/linkml/issues/177
rank: 9
domain: slot_definition
inherited: true
alias: recommended
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: boolean
multivalued:
name: multivalued
description: true means that slot can have more than one value and should be represented
using a list or collection structure.
in_subset:
- SpecificationSubset
- MinimalSubset
- BasicSubset
- ObjectOrientedProfile
from_schema: https://w3id.org/linkml/meta
rank: 7
domain: slot_definition
inherited: true
alias: multivalued
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: boolean
inlined:
name: inlined
description: True means that keyed or identified slot appears in an outer structure
by value. False means that only the key or identifier for the slot appears
within the domain, referencing a structure that appears elsewhere.
comments:
- classes without keys or identifiers are necessarily inlined as lists
- only applicable in tree-like serializations, e.g json, yaml
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://w3id.org/linkml/docs/specification/06mapping/#collection-forms
- https://linkml.io/linkml/schemas/inlining.html
rank: 25
domain: slot_definition
inherited: true
alias: inlined
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: boolean
inlined_as_list:
name: inlined_as_list
description: True means that an inlined slot is represented as a list of range
instances. False means that an inlined slot is represented as a dictionary,
whose key is the slot key or identifier and whose value is the range instance.
comments:
- 'The default loader will accept either list or dictionary form as input. This
parameter controls internal
representation and output.'
- 'A keyed or identified class with one additional slot can be input in a third
form, a dictionary whose key
is the key or identifier and whose value is the one additional element. This
form is still stored according
to the inlined_as_list setting.'
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://w3id.org/linkml/docs/specification/06mapping/#collection-forms
- https://linkml.io/linkml/schemas/inlining.html
rank: 27
domain: slot_definition
inherited: true
alias: inlined_as_list
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: boolean
minimum_value:
name: minimum_value
description: For ordinal ranges, the value must be equal to or higher than this
notes:
- Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- low value
rank: 1000
domain: slot_definition
inherited: true
alias: minimum_value
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: Anything
maximum_value:
name: maximum_value
description: For ordinal ranges, the value must be equal to or lower than this
notes:
- Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- high value
rank: 1000
domain: slot_definition
inherited: true
alias: maximum_value
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: Anything
pattern:
name: pattern
description: the string value of the slot must conform to this regular expression
expressed in the string
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 35
domain: definition
inherited: true
alias: pattern
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: string
structured_pattern:
name: structured_pattern
description: the string value of the slot must conform to the regular expression
in the pattern expression
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://linkml.io/linkml/schemas/constraints.html#structured-patterns
rank: 1000
domain: definition
inherited: true
alias: structured_pattern
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: pattern_expression
unit:
name: unit
description: an encoding of a unit
from_schema: https://w3id.org/linkml/meta
rank: 1000
slot_uri: qudt:unit
alias: unit
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
- permissible_value
range: UnitOfMeasure
implicit_prefix:
name: implicit_prefix
description: Causes the slot value to be interpreted as a uriorcurie after prefixing
with this string
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
domain: slot_expression
alias: implicit_prefix
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: string
value_presence:
name: value_presence
description: if PRESENT then a value must be present (for lists there must be
at least one value). If ABSENT then a value must be absent (for lists, must
be empty)
comments:
- if set to true this has the same effect as required=true. In contrast, required=false
allows a value to be present
from_schema: https://w3id.org/linkml/meta
status: unstable
rank: 1000
is_a: list_value_specification_constant
domain: slot_definition
inherited: true
alias: value_presence
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: presence_enum
equals_string:
name: equals_string
description: the slot must have range string and the value of the slot must equal
the specified value
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: equals_string
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: string
equals_string_in:
name: equals_string_in
description: the slot must have range string and the value of the slot must equal
one of the specified values
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
is_a: list_value_specification_constant
multivalued: true
inherited: true
alias: equals_string_in
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: string
equals_number:
name: equals_number
description: the slot must have range of a number and the value of the slot must
equal the specified value
from_schema: https://w3id.org/linkml/meta
status: unstable
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: equals_number
owner: anonymous_slot_expression
domain_of:
- type_expression
- slot_expression
range: integer
equals_expression:
name: equals_expression
description: the value of the slot must equal the value of the evaluated expression
comments:
- for example, a 'length' slot may have an equals_expression with value '(end-start)+1'
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://linkml.io/linkml/developers/inference.html
- https://linkml.io/linkml/schemas/advanced.html#equals-expression
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: equals_expression
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: string
exact_cardinality:
name: exact_cardinality
description: the exact number of entries for a multivalued slot
comments:
- if exact_cardinality is set, then minimum_cardinalty and maximum_cardinality
must be unset or have the same value
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: exact_cardinality
owner: anonymous_slot_expression
domain_of:
- slot_expression
- dimension_expression
range: integer
minimum_cardinality:
name: minimum_cardinality
description: the minimum number of entries for a multivalued slot
comments:
- minimum_cardinality cannot be greater than maximum_cardinality
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: minimum_cardinality
owner: anonymous_slot_expression
domain_of:
- slot_expression
- dimension_expression
range: integer
maximum_cardinality:
name: maximum_cardinality
description: the maximum number of entries for a multivalued slot
comments:
- maximum_cardinality cannot be less than minimum_cardinality
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: maximum_cardinality
owner: anonymous_slot_expression
domain_of:
- slot_expression
- dimension_expression
range: integer
has_member:
name: has_member
description: the value of the slot is multivalued with at least one member satisfying
the condition
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
is_a: list_value_specification_constant
alias: has_member
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: anonymous_slot_expression
all_members:
name: all_members
description: the value of the slot is multivalued with all members satisfying
the condition
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
is_a: list_value_specification_constant
alias: all_members
owner: anonymous_slot_expression
domain_of:
- slot_expression
range: anonymous_slot_expression
none_of:
name: none_of
description: holds if none of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 105
is_a: boolean_slot
multivalued: true
alias: none_of
owner: anonymous_slot_expression
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_slot_expression
exactly_one_of:
name: exactly_one_of
description: holds if only one of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 103
is_a: boolean_slot
multivalued: true
alias: exactly_one_of
owner: anonymous_slot_expression
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_slot_expression
any_of:
name: any_of
description: holds if at least one of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 101
is_a: boolean_slot
multivalued: true
alias: any_of
owner: anonymous_slot_expression
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_slot_expression
all_of:
name: all_of
description: holds if all of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 107
is_a: boolean_slot
multivalued: true
alias: all_of
owner: anonymous_slot_expression
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_slot_expression
extensions:
name: extensions
description: a tag/text tuple attached to an arbitrary element
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: extensible
multivalued: true
alias: extensions
owner: anonymous_slot_expression
domain_of:
- extension
- extensible
range: extension
inlined: true
annotations:
name: annotations
description: a collection of tag/text tuples with the semantics of OWL Annotation
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: extensions
domain: annotatable
multivalued: true
alias: annotations
owner: anonymous_slot_expression
domain_of:
- annotatable
- annotation
range: annotation
inlined: true
description:
name: description
description: a textual description of the element's purpose and use
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- definition
exact_mappings:
- dcterms:description
- schema:description
rank: 5
domain: element
slot_uri: skos:definition
alias: description
owner: anonymous_slot_expression
domain_of:
- common_metadata
- permissible_value
range: string
recommended: true
alt_descriptions:
name: alt_descriptions
description: A sourced alternative description for an element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- alternate definitions
rank: 1000
domain: element
multivalued: true
alias: alt_descriptions
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: alt_description
inlined: true
title:
name: title
description: A concise human-readable display label for the element. The title
should mirror the name, and should use ordinary textual punctuation.
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- long name
rank: 3
domain: element
slot_uri: dcterms:title
alias: title
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
deprecated:
name: deprecated
description: Description of why and when this element will no longer be used
comments:
- note that linkml does not use a boolean to indicate deprecation status - the
presence of a string value in this field is sufficient to indicate deprecation.
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
close_mappings:
- owl:deprecated
rank: 1000
domain: element
alias: deprecated
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
todos:
name: todos
description: Outstanding issues that needs resolution
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
multivalued: true
alias: todos
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
notes:
name: notes
description: editorial notes about an element intended primarily for internal
consumption
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: skos:editorialNote
multivalued: true
alias: notes
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
comments:
name: comments
description: notes and comments about an element intended primarily for external
consumption
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
exact_mappings:
- rdfs:comment
rank: 1000
domain: element
slot_uri: skos:note
multivalued: true
alias: comments
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
examples:
name: examples
description: example usages of an element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
close_mappings:
- vann:example
rank: 1000
singular_name: example
domain: element
multivalued: true
alias: examples
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: example
inlined: true
in_subset:
name: in_subset
description: used to indicate membership of a term in a defined subset of terms
used for a particular domain or application.
comments:
- an example of use in the translator_minimal subset in the biolink model, holding
the minimal set of predicates used in a translator knowledge graph
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: OIO:inSubset
multivalued: true
alias: in_subset
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: subset_definition
from_schema:
name: from_schema
description: id of the schema that defined the element
notes:
- A stronger model would be range schema_definition, but this doesn't address
the import model
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: skos:inScheme
readonly: supplied by the schema loader or schema view
alias: from_schema
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uri
imported_from:
name: imported_from
description: the imports entry that this element was derived from. Empty means
primary source
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
readonly: supplied by the schema loader or schema view
alias: imported_from
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
source:
name: source
description: A related resource from which the element is derived.
comments:
- The described resource may be derived from the related resource in whole or
in part
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- origin
- derived from
close_mappings:
- prov:wasDerivedFrom
- schema:isBasedOn
rank: 1000
domain: element
slot_uri: dcterms:source
alias: source
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
in_language:
name: in_language
conforms_to: https://www.rfc-editor.org/rfc/bcp/bcp47.txt
description: the primary language used in the sources
comments:
- Recommended to use a string from IETF BCP 47
from_schema: https://w3id.org/linkml/meta
rank: 1000
slot_uri: schema:inLanguage
alias: in_language
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
see_also:
name: see_also
description: A list of related entities or URLs that may be of relevance
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: rdfs:seeAlso
multivalued: true
alias: see_also
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
deprecated element has exact replacement:
name: deprecated element has exact replacement
description: When an element is deprecated, it can be automatically replaced by
this uri or curie
from_schema: https://w3id.org/linkml/meta
mappings:
- IAO:0100001
rank: 1000
alias: deprecated_element_has_exact_replacement
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
deprecated element has possible replacement:
name: deprecated element has possible replacement
description: When an element is deprecated, it can be potentially replaced by
this uri or curie
from_schema: https://w3id.org/linkml/meta
mappings:
- OIO:consider
rank: 1000
alias: deprecated_element_has_possible_replacement
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
aliases:
name: aliases
description: Alternate names/labels for the element. These do not alter the semantics
of the schema, but may be useful to support search and alignment.
comments:
- not be confused with the metaslot alias.
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- synonyms
- alternate names
- alternative labels
- designations
exact_mappings:
- schema:alternateName
rank: 1000
domain: element
slot_uri: skos:altLabel
multivalued: true
alias: aliases
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string
structured_aliases:
name: structured_aliases
description: A list of structured_alias objects, used to provide aliases in conjunction
with additional metadata.
from_schema: https://w3id.org/linkml/meta
see_also:
- linkml:aliases
rank: 1000
slot_uri: skosxl:altLabel
multivalued: true
alias: structured_aliases
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: structured_alias
inlined: true
mappings:
name: mappings
description: A list of terms from different schemas or terminology systems that
have comparable meaning. These may include terms that are precisely equivalent,
broader or narrower in meaning, or otherwise semantically related but not equivalent
from a strict ontological perspective.
from_schema: https://w3id.org/linkml/meta
aliases:
- xrefs
- identifiers
- alternate identifiers
- alternate ids
rank: 1000
slot_uri: skos:mappingRelation
multivalued: true
alias: mappings
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
exact mappings:
name: exact mappings
description: A list of terms from different schemas or terminology systems that
have identical meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:exactMatch
multivalued: true
inherited: false
alias: exact_mappings
owner: anonymous_slot_expression
domain_of:
- common_metadata
- UnitOfMeasure
range: uriorcurie
close mappings:
name: close mappings
description: A list of terms from different schemas or terminology systems that
have close meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:closeMatch
multivalued: true
inherited: false
alias: close_mappings
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
related mappings:
name: related mappings
description: A list of terms from different schemas or terminology systems that
have related meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:relatedMatch
multivalued: true
inherited: false
alias: related_mappings
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
narrow mappings:
name: narrow mappings
description: A list of terms from different schemas or terminology systems that
have narrower meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:narrowMatch
multivalued: true
inherited: false
alias: narrow_mappings
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
broad mappings:
name: broad mappings
description: A list of terms from different schemas or terminology systems that
have broader meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:broadMatch
multivalued: true
inherited: false
alias: broad_mappings
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
created_by:
name: created_by
description: agent that created the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: pav:createdBy
alias: created_by
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
contributors:
name: contributors
description: agent that contributed to the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: dcterms:contributor
multivalued: true
alias: contributors
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
created_on:
name: created_on
description: time at which the element was created
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: pav:createdOn
alias: created_on
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: datetime
last_updated_on:
name: last_updated_on
description: time at which the element was last updated
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: pav:lastUpdatedOn
alias: last_updated_on
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: datetime
modified_by:
name: modified_by
description: agent that modified the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: oslc:modifiedBy
alias: modified_by
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
status:
name: status
description: status of the element
examples:
- value: bibo:draft
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://www.hl7.org/fhir/valueset-publication-status.html
- https://www.hl7.org/fhir/versions.html#std-process
aliases:
- workflow status
rank: 1000
domain: element
slot_uri: bibo:status
alias: status
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: uriorcurie
rank:
name: rank
description: the relative order in which the element occurs, lower values are
given precedence
comments:
- the rank of an element does not affect the semantics
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- order
- precedence
- display order
exact_mappings:
- qudt:order
- qb:order
rank: 51
slot_uri: sh:order
alias: rank
owner: anonymous_slot_expression
domain_of:
- common_metadata
- class_rule
range: integer
categories:
name: categories
description: Controlled terms used to categorize an element.
comments:
- if you wish to use uncontrolled terms or terms that lack identifiers then use
the keywords element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
singular_name: category
slot_uri: dcterms:subject
multivalued: true
alias: categories
owner: anonymous_slot_expression
domain_of:
- common_metadata
- structured_alias
range: uriorcurie
keywords:
name: keywords
description: Keywords or tags used to describe the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
singular_name: keyword
domain: element
slot_uri: schema:keywords
multivalued: true
alias: keywords
owner: anonymous_slot_expression
domain_of:
- common_metadata
range: string