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Class: SchemaDefinition

A collection of definitions that make up a schema or a data model.

URI: linkml:SchemaDefinition

classDiagram class SchemaDefinition Element <|-- SchemaDefinition SchemaDefinition : aliases SchemaDefinition : alt_descriptions SchemaDefinition --> alt_description : alt_descriptions SchemaDefinition : annotations SchemaDefinition --> annotation : annotations SchemaDefinition : bindings SchemaDefinition --> enum_binding : bindings SchemaDefinition : broad_mappings SchemaDefinition : categories SchemaDefinition : classes SchemaDefinition --> class_definition : classes SchemaDefinition : close_mappings SchemaDefinition : comments SchemaDefinition : conforms_to SchemaDefinition : contributors SchemaDefinition : created_by SchemaDefinition : created_on SchemaDefinition : default_curi_maps SchemaDefinition : default_prefix SchemaDefinition : default_range SchemaDefinition --> type_definition : default_range SchemaDefinition : definition_uri SchemaDefinition : deprecated SchemaDefinition : deprecated_element_has_exact_replacement SchemaDefinition : deprecated_element_has_possible_replacement SchemaDefinition : description SchemaDefinition : emit_prefixes SchemaDefinition : enums SchemaDefinition --> enum_definition : enums SchemaDefinition : exact_mappings SchemaDefinition : examples SchemaDefinition --> example : examples SchemaDefinition : extensions SchemaDefinition --> extension : extensions SchemaDefinition : from_schema SchemaDefinition : generation_date SchemaDefinition : id SchemaDefinition : id_prefixes SchemaDefinition : id_prefixes_are_closed SchemaDefinition : implements SchemaDefinition : imported_from SchemaDefinition : imports SchemaDefinition : in_language SchemaDefinition : in_subset SchemaDefinition --> subset_definition : in_subset SchemaDefinition : instantiates SchemaDefinition : keywords SchemaDefinition : last_updated_on SchemaDefinition : license SchemaDefinition : local_names SchemaDefinition --> local_name : local_names SchemaDefinition : mappings SchemaDefinition : metamodel_version SchemaDefinition : modified_by SchemaDefinition : name SchemaDefinition : narrow_mappings SchemaDefinition : notes SchemaDefinition : prefixes SchemaDefinition --> prefix : prefixes SchemaDefinition : rank SchemaDefinition : related_mappings SchemaDefinition : see_also SchemaDefinition : settings SchemaDefinition --> setting : settings SchemaDefinition : slot_definitions SchemaDefinition --> slot_definition : slot_definitions SchemaDefinition : slot_names_unique SchemaDefinition : source SchemaDefinition : source_file SchemaDefinition : source_file_date SchemaDefinition : source_file_size SchemaDefinition : status SchemaDefinition : structured_aliases SchemaDefinition --> structured_alias : structured_aliases SchemaDefinition : subsets SchemaDefinition --> subset_definition : subsets SchemaDefinition : title SchemaDefinition : todos SchemaDefinition : types SchemaDefinition --> type_definition : types SchemaDefinition : version

Inheritance

Slots

Name Cardinality and Range Description Inheritance
id 1..1
Uri
The official schema URI direct
version 0..1
String
particular version of schema direct
imports 0..*
Uriorcurie
A list of schemas that are to be included in this schema direct
license 0..1
String
license for the schema direct
prefixes 0..*
Prefix
A collection of prefix expansions that specify how CURIEs can be expanded to ... direct
emit_prefixes 0..*
Ncname
a list of Curie prefixes that are used in the representation of instances of ... direct
default_curi_maps 0..*
String
ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes... direct
default_prefix 0..1
String
The prefix that is used for all elements within a schema direct
default_range 0..1
TypeDefinition
default slot range to be used if range element is omitted from a slot definit... direct
subsets 0..*
SubsetDefinition
An index to the collection of all subset definitions in the schema direct
types 0..*
TypeDefinition
An index to the collection of all type definitions in the schema direct
enums 0..*
EnumDefinition
An index to the collection of all enum definitions in the schema direct
slot_definitions 0..*
SlotDefinition
An index to the collection of all slot definitions in the schema direct
classes 0..*
ClassDefinition
An index to the collection of all class definitions in the schema direct
metamodel_version 0..1
String
Version of the metamodel used to load the schema direct
source_file 0..1
String
name, uri or description of the source of the schema direct
source_file_date 0..1
Datetime
modification date of the source of the schema direct
source_file_size 0..1
Integer
size in bytes of the source of the schema direct
generation_date 0..1
Datetime
date and time that the schema was loaded/generated direct
slot_names_unique 0..1
Boolean
if true then induced/mangled slot names are not created for class_usage and a... direct
settings 0..*
Setting
A collection of global variable settings direct
bindings 0..*
EnumBinding
A collection of enum bindings that specify how a slot can be bound to a permi... direct
name 1..1
Ncname
a unique name for the schema that is both human-readable and consists of only... Element
id_prefixes 0..*
Ncname
An allowed list of prefixes for which identifiers must conform Element
id_prefixes_are_closed 0..1
Boolean
If true, then the id_prefixes slot is treated as being closed, and any use of... Element
definition_uri 0..1
Uriorcurie
The native URI of the element Element
local_names 0..*
LocalName
Element
conforms_to 0..1
String
An established standard to which the element conforms Element
implements 0..*
Uriorcurie
An element in another schema which this element conforms to Element
instantiates 0..*
Uriorcurie
An element in another schema which this element instantiates Element
extensions 0..*
Extension
a tag/text tuple attached to an arbitrary element Extensible
annotations 0..*
Annotation
a collection of tag/text tuples with the semantics of OWL Annotation Annotatable
description 0..1 recommended
String
a textual description of the element's purpose and use CommonMetadata
alt_descriptions 0..*
AltDescription
A sourced alternative description for an element CommonMetadata
title 0..1
String
A concise human-readable display label for the element CommonMetadata
deprecated 0..1
String
Description of why and when this element will no longer be used CommonMetadata
todos 0..*
String
Outstanding issues that needs resolution CommonMetadata
notes 0..*
String
editorial notes about an element intended primarily for internal consumption CommonMetadata
comments 0..*
String
notes and comments about an element intended primarily for external consumpti... CommonMetadata
examples 0..*
Example
example usages of an element CommonMetadata
in_subset 0..*
SubsetDefinition
used to indicate membership of a term in a defined subset of terms used for a... CommonMetadata
from_schema 0..1
Uri
id of the schema that defined the element CommonMetadata
imported_from 0..1
String
the imports entry that this element was derived from CommonMetadata
source 0..1
Uriorcurie
A related resource from which the element is derived CommonMetadata
in_language 0..1
String
the primary language used in the sources CommonMetadata
see_also 0..*
Uriorcurie
A list of related entities or URLs that may be of relevance CommonMetadata
deprecated_element_has_exact_replacement 0..1
Uriorcurie
When an element is deprecated, it can be automatically replaced by this uri o... CommonMetadata
deprecated_element_has_possible_replacement 0..1
Uriorcurie
When an element is deprecated, it can be potentially replaced by this uri or ... CommonMetadata
aliases 0..*
String
Alternate names/labels for the element CommonMetadata
structured_aliases 0..*
StructuredAlias
A list of structured_alias objects, used to provide aliases in conjunction wi... CommonMetadata
mappings 0..*
Uriorcurie
A list of terms from different schemas or terminology systems that have compa... CommonMetadata
exact_mappings 0..*
Uriorcurie
A list of terms from different schemas or terminology systems that have ident... CommonMetadata
close_mappings 0..*
Uriorcurie
A list of terms from different schemas or terminology systems that have close... CommonMetadata
related_mappings 0..*
Uriorcurie
A list of terms from different schemas or terminology systems that have relat... CommonMetadata
narrow_mappings 0..*
Uriorcurie
A list of terms from different schemas or terminology systems that have narro... CommonMetadata
broad_mappings 0..*
Uriorcurie
A list of terms from different schemas or terminology systems that have broad... CommonMetadata
created_by 0..1
Uriorcurie
agent that created the element CommonMetadata
contributors 0..*
Uriorcurie
agent that contributed to the element CommonMetadata
created_on 0..1
Datetime
time at which the element was created CommonMetadata
last_updated_on 0..1
Datetime
time at which the element was last updated CommonMetadata
modified_by 0..1
Uriorcurie
agent that modified the element CommonMetadata
status 0..1
Uriorcurie
status of the element CommonMetadata
rank 0..1
Integer
the relative order in which the element occurs, lower values are given preced... CommonMetadata
categories 0..*
Uriorcurie
Controlled terms used to categorize an element CommonMetadata
keywords 0..*
String
Keywords or tags used to describe the element CommonMetadata

Usages

used by used in type used
SchemaDefinition id domain SchemaDefinition
SchemaDefinition version domain SchemaDefinition
SchemaDefinition imports domain SchemaDefinition
SchemaDefinition license domain SchemaDefinition
SchemaDefinition prefixes domain SchemaDefinition
SchemaDefinition emit_prefixes domain SchemaDefinition
SchemaDefinition default_curi_maps domain SchemaDefinition
SchemaDefinition default_prefix domain SchemaDefinition
SchemaDefinition default_range domain SchemaDefinition
SchemaDefinition subsets domain SchemaDefinition
SchemaDefinition types domain SchemaDefinition
SchemaDefinition enums domain SchemaDefinition
SchemaDefinition slot_definitions domain SchemaDefinition
SchemaDefinition classes domain SchemaDefinition
SchemaDefinition metamodel_version domain SchemaDefinition
SchemaDefinition source_file domain SchemaDefinition
SchemaDefinition source_file_date domain SchemaDefinition
SchemaDefinition source_file_size domain SchemaDefinition
SchemaDefinition generation_date domain SchemaDefinition
SchemaDefinition settings domain SchemaDefinition

Aliases

  • data dictionary
  • data model
  • information model
  • logical model
  • schema
  • model

See Also

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/linkml/meta

Mappings

Mapping Type Mapped Value
self linkml:SchemaDefinition
native linkml:SchemaDefinition
close qb:ComponentSet, owl:Ontology

LinkML Source

Direct

name: schema_definition
description: A collection of definitions that make up a schema or a data model.
in_subset:
- SpecificationSubset
- MinimalSubset
- BasicSubset
- RelationalModelProfile
- ObjectOrientedProfile
- OwlProfile
from_schema: https://w3id.org/linkml/meta
see_also:
- https://en.wikipedia.org/wiki/Data_dictionary
aliases:
- data dictionary
- data model
- information model
- logical model
- schema
- model
close_mappings:
- qb:ComponentSet
- owl:Ontology
rank: 1
is_a: element
slots:
- id
- version
- imports
- license
- prefixes
- emit_prefixes
- default_curi_maps
- default_prefix
- default_range
- subsets
- types
- enums
- slot_definitions
- classes
- metamodel_version
- source_file
- source_file_date
- source_file_size
- generation_date
- slot_names_unique
- settings
- bindings
slot_usage:
  name:
    name: name
    description: a unique name for the schema that is both human-readable and consists
      of only characters from the NCName set
    domain_of:
    - element
    range: ncname
tree_root: true

Induced

name: schema_definition
description: A collection of definitions that make up a schema or a data model.
in_subset:
- SpecificationSubset
- MinimalSubset
- BasicSubset
- RelationalModelProfile
- ObjectOrientedProfile
- OwlProfile
from_schema: https://w3id.org/linkml/meta
see_also:
- https://en.wikipedia.org/wiki/Data_dictionary
aliases:
- data dictionary
- data model
- information model
- logical model
- schema
- model
close_mappings:
- qb:ComponentSet
- owl:Ontology
rank: 1
is_a: element
slot_usage:
  name:
    name: name
    description: a unique name for the schema that is both human-readable and consists
      of only characters from the NCName set
    domain_of:
    - element
    range: ncname
attributes:
  id:
    name: id
    description: The official schema URI
    in_subset:
    - SpecificationSubset
    - MinimalSubset
    - BasicSubset
    - OwlProfile
    from_schema: https://w3id.org/linkml/meta
    rank: 0
    domain: schema_definition
    alias: id
    owner: schema_definition
    domain_of:
    - schema_definition
    range: uri
    required: true
  version:
    name: version
    description: particular version of schema
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - schema:schemaVersion
    rank: 1000
    domain: schema_definition
    slot_uri: pav:version
    alias: version
    owner: schema_definition
    domain_of:
    - schema_definition
    range: string
  imports:
    name: imports
    description: A list of schemas that are to be included in this schema
    in_subset:
    - SpecificationSubset
    - BasicSubset
    - OwlProfile
    from_schema: https://w3id.org/linkml/meta
    rank: 21
    domain: schema_definition
    multivalued: true
    alias: imports
    owner: schema_definition
    domain_of:
    - schema_definition
    range: uriorcurie
  license:
    name: license
    description: license for the schema
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 31
    domain: schema_definition
    slot_uri: dcterms:license
    alias: license
    owner: schema_definition
    domain_of:
    - schema_definition
    range: string
  prefixes:
    name: prefixes
    description: A collection of prefix expansions that specify how CURIEs can be
      expanded to URIs
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 10
    domain: schema_definition
    slot_uri: sh:declare
    multivalued: true
    alias: prefixes
    owner: schema_definition
    domain_of:
    - schema_definition
    range: prefix
    inlined: true
  emit_prefixes:
    name: emit_prefixes
    description: a list of Curie prefixes that are used in the representation of instances
      of the model.  All prefixes in this list are added to the prefix sections of
      the target models.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: schema_definition
    multivalued: true
    alias: emit_prefixes
    owner: schema_definition
    domain_of:
    - schema_definition
    range: ncname
  default_curi_maps:
    name: default_curi_maps
    description: ordered list of prefixcommon biocontexts to be fetched to resolve
      id prefixes and inline prefix variables
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: schema_definition
    multivalued: true
    alias: default_curi_maps
    owner: schema_definition
    domain_of:
    - schema_definition
    range: string
  default_prefix:
    name: default_prefix
    description: The prefix that is used for all elements within a schema
    in_subset:
    - SpecificationSubset
    - MinimalSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 11
    domain: schema_definition
    ifabsent: default_ns
    alias: default_prefix
    owner: schema_definition
    domain_of:
    - schema_definition
    range: string
  default_range:
    name: default_range
    description: default slot range to be used if range element is omitted from a
      slot definition
    in_subset:
    - SpecificationSubset
    - MinimalSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 13
    domain: schema_definition
    alias: default_range
    owner: schema_definition
    domain_of:
    - schema_definition
    range: type_definition
  subsets:
    name: subsets
    description: An index to the collection of all subset definitions in the schema
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - OIO:hasSubset
    rank: 8
    domain: schema_definition
    multivalued: true
    alias: subsets
    owner: schema_definition
    domain_of:
    - schema_definition
    range: subset_definition
    inlined: true
  types:
    name: types
    description: An index to the collection of all type definitions in the schema
    in_subset:
    - BasicSubset
    - ObjectOrientedProfile
    - OwlProfile
    from_schema: https://w3id.org/linkml/meta
    rank: 6
    domain: schema_definition
    multivalued: true
    alias: types
    owner: schema_definition
    domain_of:
    - schema_definition
    range: type_definition
    inlined: true
  enums:
    name: enums
    description: An index to the collection of all enum definitions in the schema
    in_subset:
    - SpecificationSubset
    - BasicSubset
    - ObjectOrientedProfile
    - OwlProfile
    from_schema: https://w3id.org/linkml/meta
    rank: 5
    domain: schema_definition
    multivalued: true
    alias: enums
    owner: schema_definition
    domain_of:
    - schema_definition
    range: enum_definition
    inlined: true
  slot_definitions:
    name: slot_definitions
    description: An index to the collection of all slot definitions in the schema
    comments:
    - note the formal name of this element is slot_definitions, but it has alias slots,
      which is the canonical form used in yaml/json serializes of schemas.
    in_subset:
    - SpecificationSubset
    - BasicSubset
    - OwlProfile
    from_schema: https://w3id.org/linkml/meta
    rank: 4
    domain: schema_definition
    multivalued: true
    alias: slots
    owner: schema_definition
    domain_of:
    - schema_definition
    range: slot_definition
    inlined: true
  classes:
    name: classes
    description: An index to the collection of all class definitions in the schema
    in_subset:
    - SpecificationSubset
    - MinimalSubset
    - BasicSubset
    - RelationalModelProfile
    - ObjectOrientedProfile
    - OwlProfile
    from_schema: https://w3id.org/linkml/meta
    rank: 3
    domain: schema_definition
    multivalued: true
    alias: classes
    owner: schema_definition
    domain_of:
    - schema_definition
    range: class_definition
    inlined: true
  metamodel_version:
    name: metamodel_version
    description: Version of the metamodel used to load the schema
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: schema_definition
    readonly: supplied by the schema loader or schema view
    alias: metamodel_version
    owner: schema_definition
    domain_of:
    - schema_definition
    range: string
  source_file:
    name: source_file
    description: name, uri or description of the source of the schema
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: schema_definition
    readonly: supplied by the schema loader
    alias: source_file
    owner: schema_definition
    domain_of:
    - schema_definition
    range: string
  source_file_date:
    name: source_file_date
    description: modification date of the source of the schema
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: schema_definition
    readonly: supplied by the loader
    alias: source_file_date
    owner: schema_definition
    domain_of:
    - schema_definition
    range: datetime
  source_file_size:
    name: source_file_size
    description: size in bytes of the source of the schema
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: schema_definition
    readonly: supplied by the schema loader or schema view
    alias: source_file_size
    owner: schema_definition
    domain_of:
    - schema_definition
    range: integer
  generation_date:
    name: generation_date
    description: date and time that the schema was loaded/generated
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: schema_definition
    readonly: supplied by the schema loader or schema view
    alias: generation_date
    owner: schema_definition
    domain_of:
    - schema_definition
    range: datetime
  slot_names_unique:
    name: slot_names_unique
    description: if true then induced/mangled slot names are not created for class_usage
      and attributes
    from_schema: https://w3id.org/linkml/meta
    status: testing
    rank: 1000
    domain: definition
    alias: slot_names_unique
    owner: schema_definition
    domain_of:
    - schema_definition
    - class_definition
    range: boolean
  settings:
    name: settings
    description: A collection of global variable settings
    comments:
    - global variables are used in string interpolation in structured patterns
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - constants
    rank: 20
    domain: schema_definition
    multivalued: true
    alias: settings
    owner: schema_definition
    domain_of:
    - schema_definition
    range: setting
    inlined: true
  bindings:
    name: bindings
    description: 'A collection of enum bindings that specify how a slot can be bound
      to a permissible value from an enumeration.

      LinkML provides enums to allow string values to be restricted to one of a set
      of permissible values (specified statically or dynamically).

      Enum bindings allow enums to be bound to any object, including complex nested
      objects. For example, given a (generic) class Concept with slots id and label,
      it may be desirable to restrict the values the id takes on in a given context.
      For example, a HumanSample class may have a slot for representing sample site,
      with a range of concept, but the values of that slot may be restricted to concepts
      from a particular branch of an anatomy ontology.'
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    status: testing
    rank: 1000
    domain: element
    multivalued: true
    alias: bindings
    owner: schema_definition
    domain_of:
    - schema_definition
    - slot_expression
    range: enum_binding
    inlined: true
  name:
    name: name
    description: a unique name for the schema that is both human-readable and consists
      of only characters from the NCName set
    from_schema: https://w3id.org/linkml/meta
    rank: 1
    domain: element
    slot_uri: rdfs:label
    identifier: true
    alias: name
    owner: schema_definition
    domain_of:
    - element
    range: ncname
    required: true
  id_prefixes:
    name: id_prefixes
    description: An allowed list of prefixes for which identifiers must conform. The
      identifier of this class or slot must begin with the URIs referenced by this
      prefix
    comments:
    - Order of elements may be used to indicate priority order
    - If identifiers are treated as CURIEs, then the CURIE must start with one of
      the indicated prefixes followed by `:` (_should_ start if the list is open)
    - If identifiers are treated as URIs, then the URI string must start with the
      expanded for of the prefix (_should_ start if the list is open)
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - https://github.com/linkml/linkml-model/issues/28
    rank: 1000
    domain: element
    multivalued: true
    alias: id_prefixes
    owner: schema_definition
    domain_of:
    - element
    range: ncname
  id_prefixes_are_closed:
    name: id_prefixes_are_closed
    description: If true, then the id_prefixes slot is treated as being closed, and
      any use of an id that does not have this prefix is considered a violation.
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - https://github.com/linkml/linkml/issues/194
    rank: 1000
    domain: element
    alias: id_prefixes_are_closed
    owner: schema_definition
    domain_of:
    - element
    range: boolean
  definition_uri:
    name: definition_uri
    description: The native URI of the element. This is always within the namespace
      of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri
    comments:
    - Formed by combining the default_prefix with the normalized element name
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - linkml:class_uri
    - linkml:slot_uri
    rank: 1000
    domain: element
    readonly: filled in by the schema loader or schema view
    alias: definition_uri
    owner: schema_definition
    domain_of:
    - element
    range: uriorcurie
  local_names:
    name: local_names
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    multivalued: true
    alias: local_names
    owner: schema_definition
    domain_of:
    - element
    range: local_name
    inlined: true
  conforms_to:
    name: conforms_to
    description: An established standard to which the element conforms.
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - linkml:implements
    rank: 1000
    domain: element
    slot_uri: dcterms:conformsTo
    alias: conforms_to
    owner: schema_definition
    domain_of:
    - element
    range: string
  implements:
    name: implements
    description: An element in another schema which this element conforms to. The
      referenced element is not imported into the schema for the implementing element.
      However, the referenced schema may be used to check conformance of the implementing
      element.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    multivalued: true
    alias: implements
    owner: schema_definition
    domain_of:
    - element
    - permissible_value
    range: uriorcurie
  instantiates:
    name: instantiates
    description: An element in another schema which this element instantiates.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    multivalued: true
    alias: instantiates
    owner: schema_definition
    domain_of:
    - element
    - permissible_value
    range: uriorcurie
  extensions:
    name: extensions
    description: a tag/text tuple attached to an arbitrary element
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: extensible
    multivalued: true
    alias: extensions
    owner: schema_definition
    domain_of:
    - extension
    - extensible
    range: extension
    inlined: true
  annotations:
    name: annotations
    description: a collection of tag/text tuples with the semantics of OWL Annotation
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: extensions
    domain: annotatable
    multivalued: true
    alias: annotations
    owner: schema_definition
    domain_of:
    - annotatable
    - annotation
    range: annotation
    inlined: true
  description:
    name: description
    description: a textual description of the element's purpose and use
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - definition
    exact_mappings:
    - dcterms:description
    - schema:description
    rank: 5
    domain: element
    slot_uri: skos:definition
    alias: description
    owner: schema_definition
    domain_of:
    - common_metadata
    - permissible_value
    range: string
    recommended: true
  alt_descriptions:
    name: alt_descriptions
    description: A sourced alternative description for an element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - alternate definitions
    rank: 1000
    domain: element
    multivalued: true
    alias: alt_descriptions
    owner: schema_definition
    domain_of:
    - common_metadata
    range: alt_description
    inlined: true
  title:
    name: title
    description: A concise human-readable display label for the element. The title
      should mirror the name, and should use ordinary textual punctuation.
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - long name
    rank: 3
    domain: element
    slot_uri: dcterms:title
    alias: title
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  deprecated:
    name: deprecated
    description: Description of why and when this element will no longer be used
    comments:
    - note that linkml does not use a boolean to indicate deprecation status - the
      presence of a string value in this field is sufficient to indicate deprecation.
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    close_mappings:
    - owl:deprecated
    rank: 1000
    domain: element
    alias: deprecated
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  todos:
    name: todos
    description: Outstanding issues that needs resolution
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    multivalued: true
    alias: todos
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  notes:
    name: notes
    description: editorial notes about an element intended primarily for internal
      consumption
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: skos:editorialNote
    multivalued: true
    alias: notes
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  comments:
    name: comments
    description: notes and comments about an element intended primarily for external
      consumption
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    exact_mappings:
    - rdfs:comment
    rank: 1000
    domain: element
    slot_uri: skos:note
    multivalued: true
    alias: comments
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  examples:
    name: examples
    description: example usages of an element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    close_mappings:
    - vann:example
    rank: 1000
    singular_name: example
    domain: element
    multivalued: true
    alias: examples
    owner: schema_definition
    domain_of:
    - common_metadata
    range: example
    inlined: true
  in_subset:
    name: in_subset
    description: used to indicate membership of a term in a defined subset of terms
      used for a particular domain or application.
    comments:
    - an example of use in the translator_minimal subset in the biolink model, holding
      the minimal set of predicates used in a translator knowledge graph
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: OIO:inSubset
    multivalued: true
    alias: in_subset
    owner: schema_definition
    domain_of:
    - common_metadata
    range: subset_definition
  from_schema:
    name: from_schema
    description: id of the schema that defined the element
    notes:
    - A stronger model would be range schema_definition, but this doesn't address
      the import model
    in_subset:
    - SpecificationSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: skos:inScheme
    readonly: supplied by the schema loader or schema view
    alias: from_schema
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uri
  imported_from:
    name: imported_from
    description: the imports entry that this element was derived from.  Empty means
      primary source
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    readonly: supplied by the schema loader or schema view
    alias: imported_from
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  source:
    name: source
    description: A related resource from which the element is derived.
    comments:
    - The described resource may be derived from the related resource in whole or
      in part
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - origin
    - derived from
    close_mappings:
    - prov:wasDerivedFrom
    - schema:isBasedOn
    rank: 1000
    domain: element
    slot_uri: dcterms:source
    alias: source
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  in_language:
    name: in_language
    conforms_to: https://www.rfc-editor.org/rfc/bcp/bcp47.txt
    description: the primary language used in the sources
    comments:
    - Recommended to use a string from IETF BCP 47
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    slot_uri: schema:inLanguage
    alias: in_language
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  see_also:
    name: see_also
    description: A list of related entities or URLs that may be of relevance
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: rdfs:seeAlso
    multivalued: true
    alias: see_also
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  deprecated element has exact replacement:
    name: deprecated element has exact replacement
    description: When an element is deprecated, it can be automatically replaced by
      this uri or curie
    from_schema: https://w3id.org/linkml/meta
    mappings:
    - IAO:0100001
    rank: 1000
    alias: deprecated_element_has_exact_replacement
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  deprecated element has possible replacement:
    name: deprecated element has possible replacement
    description: When an element is deprecated, it can be potentially replaced by
      this uri or curie
    from_schema: https://w3id.org/linkml/meta
    mappings:
    - OIO:consider
    rank: 1000
    alias: deprecated_element_has_possible_replacement
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  aliases:
    name: aliases
    description: Alternate names/labels for the element. These do not alter the semantics
      of the schema, but may be useful to support search and alignment.
    comments:
    - not be confused with the metaslot alias.
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - synonyms
    - alternate names
    - alternative labels
    - designations
    exact_mappings:
    - schema:alternateName
    rank: 1000
    domain: element
    slot_uri: skos:altLabel
    multivalued: true
    alias: aliases
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
  structured_aliases:
    name: structured_aliases
    description: A list of structured_alias objects, used to provide aliases in conjunction
      with additional metadata.
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - linkml:aliases
    rank: 1000
    slot_uri: skosxl:altLabel
    multivalued: true
    alias: structured_aliases
    owner: schema_definition
    domain_of:
    - common_metadata
    range: structured_alias
    inlined: true
  mappings:
    name: mappings
    description: A list of terms from different schemas or terminology systems that
      have comparable meaning. These may include terms that are precisely equivalent,
      broader or narrower in meaning, or otherwise semantically related but not equivalent
      from a strict ontological perspective.
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - xrefs
    - identifiers
    - alternate identifiers
    - alternate ids
    rank: 1000
    slot_uri: skos:mappingRelation
    multivalued: true
    alias: mappings
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  exact mappings:
    name: exact mappings
    description: A list of terms from different schemas or terminology systems that
      have identical meaning.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: mappings
    slot_uri: skos:exactMatch
    multivalued: true
    inherited: false
    alias: exact_mappings
    owner: schema_definition
    domain_of:
    - common_metadata
    - UnitOfMeasure
    range: uriorcurie
  close mappings:
    name: close mappings
    description: A list of terms from different schemas or terminology systems that
      have close meaning.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: mappings
    slot_uri: skos:closeMatch
    multivalued: true
    inherited: false
    alias: close_mappings
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  related mappings:
    name: related mappings
    description: A list of terms from different schemas or terminology systems that
      have related meaning.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: mappings
    slot_uri: skos:relatedMatch
    multivalued: true
    inherited: false
    alias: related_mappings
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  narrow mappings:
    name: narrow mappings
    description: A list of terms from different schemas or terminology systems that
      have narrower meaning.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: mappings
    slot_uri: skos:narrowMatch
    multivalued: true
    inherited: false
    alias: narrow_mappings
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  broad mappings:
    name: broad mappings
    description: A list of terms from different schemas or terminology systems that
      have broader meaning.
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    is_a: mappings
    slot_uri: skos:broadMatch
    multivalued: true
    inherited: false
    alias: broad_mappings
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  created_by:
    name: created_by
    description: agent that created the element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: pav:createdBy
    alias: created_by
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  contributors:
    name: contributors
    description: agent that contributed to the element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: dcterms:contributor
    multivalued: true
    alias: contributors
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  created_on:
    name: created_on
    description: time at which the element was created
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: pav:createdOn
    alias: created_on
    owner: schema_definition
    domain_of:
    - common_metadata
    range: datetime
  last_updated_on:
    name: last_updated_on
    description: time at which the element was last updated
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: pav:lastUpdatedOn
    alias: last_updated_on
    owner: schema_definition
    domain_of:
    - common_metadata
    range: datetime
  modified_by:
    name: modified_by
    description: agent that modified the element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    domain: element
    slot_uri: oslc:modifiedBy
    alias: modified_by
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  status:
    name: status
    description: status of the element
    examples:
    - value: bibo:draft
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    see_also:
    - https://www.hl7.org/fhir/valueset-publication-status.html
    - https://www.hl7.org/fhir/versions.html#std-process
    aliases:
    - workflow status
    rank: 1000
    domain: element
    slot_uri: bibo:status
    alias: status
    owner: schema_definition
    domain_of:
    - common_metadata
    range: uriorcurie
  rank:
    name: rank
    description: the relative order in which the element occurs, lower values are
      given precedence
    comments:
    - the rank of an element does not affect the semantics
    in_subset:
    - SpecificationSubset
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    aliases:
    - order
    - precedence
    - display order
    exact_mappings:
    - qudt:order
    - qb:order
    rank: 51
    slot_uri: sh:order
    alias: rank
    owner: schema_definition
    domain_of:
    - common_metadata
    - class_rule
    range: integer
  categories:
    name: categories
    description: Controlled terms used to categorize an element.
    comments:
    - if you wish to use uncontrolled terms or terms that lack identifiers then use
      the keywords element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    singular_name: category
    slot_uri: dcterms:subject
    multivalued: true
    alias: categories
    owner: schema_definition
    domain_of:
    - common_metadata
    - structured_alias
    range: uriorcurie
  keywords:
    name: keywords
    description: Keywords or tags used to describe the element
    in_subset:
    - BasicSubset
    from_schema: https://w3id.org/linkml/meta
    rank: 1000
    singular_name: keyword
    domain: element
    slot_uri: schema:keywords
    multivalued: true
    alias: keywords
    owner: schema_definition
    domain_of:
    - common_metadata
    range: string
tree_root: true