Class: TypeDefinition
an element that whose instances are atomic scalar values that can be mapped to primitive types
classDiagram
class TypeDefinition
TypeExpression <|-- TypeDefinition
Element <|-- TypeDefinition
TypeDefinition : aliases
TypeDefinition : all_of
TypeDefinition --> anonymous_type_expression : all_of
TypeDefinition : alt_descriptions
TypeDefinition --> alt_description : alt_descriptions
TypeDefinition : annotations
TypeDefinition --> annotation : annotations
TypeDefinition : any_of
TypeDefinition --> anonymous_type_expression : any_of
TypeDefinition : base
TypeDefinition : broad_mappings
TypeDefinition : categories
TypeDefinition : close_mappings
TypeDefinition : comments
TypeDefinition : conforms_to
TypeDefinition : contributors
TypeDefinition : created_by
TypeDefinition : created_on
TypeDefinition : definition_uri
TypeDefinition : deprecated
TypeDefinition : deprecated_element_has_exact_replacement
TypeDefinition : deprecated_element_has_possible_replacement
TypeDefinition : description
TypeDefinition : equals_number
TypeDefinition : equals_string
TypeDefinition : equals_string_in
TypeDefinition : exact_mappings
TypeDefinition : exactly_one_of
TypeDefinition --> anonymous_type_expression : exactly_one_of
TypeDefinition : examples
TypeDefinition --> example : examples
TypeDefinition : extensions
TypeDefinition --> extension : extensions
TypeDefinition : from_schema
TypeDefinition : id_prefixes
TypeDefinition : id_prefixes_are_closed
TypeDefinition : implements
TypeDefinition : implicit_prefix
TypeDefinition : imported_from
TypeDefinition : in_language
TypeDefinition : in_subset
TypeDefinition --> subset_definition : in_subset
TypeDefinition : instantiates
TypeDefinition : keywords
TypeDefinition : last_updated_on
TypeDefinition : local_names
TypeDefinition --> local_name : local_names
TypeDefinition : mappings
TypeDefinition : maximum_value
TypeDefinition --> Anything : maximum_value
TypeDefinition : minimum_value
TypeDefinition --> Anything : minimum_value
TypeDefinition : modified_by
TypeDefinition : name
TypeDefinition : narrow_mappings
TypeDefinition : none_of
TypeDefinition --> anonymous_type_expression : none_of
TypeDefinition : notes
TypeDefinition : pattern
TypeDefinition : rank
TypeDefinition : related_mappings
TypeDefinition : repr
TypeDefinition : see_also
TypeDefinition : source
TypeDefinition : status
TypeDefinition : structured_aliases
TypeDefinition --> structured_alias : structured_aliases
TypeDefinition : structured_pattern
TypeDefinition --> pattern_expression : structured_pattern
TypeDefinition : title
TypeDefinition : todos
TypeDefinition : type_uri
TypeDefinition : typeof
TypeDefinition --> type_definition : typeof
TypeDefinition : union_of
TypeDefinition --> type_definition : union_of
TypeDefinition : unit
TypeDefinition --> UnitOfMeasure : unit
Inheritance
- Element [ Extensible Annotatable CommonMetadata]
- TypeDefinition [ TypeExpression]
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
typeof | 0..1 TypeDefinition |
A parent type from which type properties are inherited | direct |
base | 0..1 String |
python base type in the LinkML runtime that implements this type definition | direct |
type_uri | 0..1 Uriorcurie |
The uri that defines the possible values for the type definition | direct |
repr | 0..1 String |
the name of the python object that implements this type definition | direct |
union_of | 0..* TypeDefinition |
indicates that the domain element consists exactly of the members of the elem... | direct |
pattern | 0..1 String |
the string value of the slot must conform to this regular expression expresse... | TypeExpression |
structured_pattern | 0..1 PatternExpression |
the string value of the slot must conform to the regular expression in the pa... | TypeExpression |
unit | 0..1 UnitOfMeasure |
an encoding of a unit | TypeExpression |
implicit_prefix | 0..1 String |
Causes the slot value to be interpreted as a uriorcurie after prefixing with ... | TypeExpression |
equals_string | 0..1 String |
the slot must have range string and the value of the slot must equal the spec... | TypeExpression |
equals_string_in | 0..* String |
the slot must have range string and the value of the slot must equal one of t... | TypeExpression |
equals_number | 0..1 Integer |
the slot must have range of a number and the value of the slot must equal the... | TypeExpression |
minimum_value | 0..1 Anything |
For ordinal ranges, the value must be equal to or higher than this | TypeExpression |
maximum_value | 0..1 Anything |
For ordinal ranges, the value must be equal to or lower than this | TypeExpression |
none_of | 0..* AnonymousTypeExpression |
holds if none of the expressions hold | TypeExpression |
exactly_one_of | 0..* AnonymousTypeExpression |
holds if only one of the expressions hold | TypeExpression |
any_of | 0..* AnonymousTypeExpression |
holds if at least one of the expressions hold | TypeExpression |
all_of | 0..* AnonymousTypeExpression |
holds if all of the expressions hold | TypeExpression |
name | 1..1 String |
the unique name of the element within the context of the schema | Element |
id_prefixes | 0..* Ncname |
An allowed list of prefixes for which identifiers must conform | Element |
id_prefixes_are_closed | 0..1 Boolean |
If true, then the id_prefixes slot is treated as being closed, and any use of... | Element |
definition_uri | 0..1 Uriorcurie |
The native URI of the element | Element |
local_names | 0..* LocalName |
Element | |
conforms_to | 0..1 String |
An established standard to which the element conforms | Element |
implements | 0..* Uriorcurie |
An element in another schema which this element conforms to | Element |
instantiates | 0..* Uriorcurie |
An element in another schema which this element instantiates | Element |
extensions | 0..* Extension |
a tag/text tuple attached to an arbitrary element | Extensible |
annotations | 0..* Annotation |
a collection of tag/text tuples with the semantics of OWL Annotation | Annotatable |
description | 0..1 recommended String |
a textual description of the element's purpose and use | CommonMetadata |
alt_descriptions | 0..* AltDescription |
A sourced alternative description for an element | CommonMetadata |
title | 0..1 String |
A concise human-readable display label for the element | CommonMetadata |
deprecated | 0..1 String |
Description of why and when this element will no longer be used | CommonMetadata |
todos | 0..* String |
Outstanding issues that needs resolution | CommonMetadata |
notes | 0..* String |
editorial notes about an element intended primarily for internal consumption | CommonMetadata |
comments | 0..* String |
notes and comments about an element intended primarily for external consumpti... | CommonMetadata |
examples | 0..* Example |
example usages of an element | CommonMetadata |
in_subset | 0..* SubsetDefinition |
used to indicate membership of a term in a defined subset of terms used for a... | CommonMetadata |
from_schema | 0..1 Uri |
id of the schema that defined the element | CommonMetadata |
imported_from | 0..1 String |
the imports entry that this element was derived from | CommonMetadata |
source | 0..1 Uriorcurie |
A related resource from which the element is derived | CommonMetadata |
in_language | 0..1 String |
the primary language used in the sources | CommonMetadata |
see_also | 0..* Uriorcurie |
A list of related entities or URLs that may be of relevance | CommonMetadata |
deprecated_element_has_exact_replacement | 0..1 Uriorcurie |
When an element is deprecated, it can be automatically replaced by this uri o... | CommonMetadata |
deprecated_element_has_possible_replacement | 0..1 Uriorcurie |
When an element is deprecated, it can be potentially replaced by this uri or ... | CommonMetadata |
aliases | 0..* String |
Alternate names/labels for the element | CommonMetadata |
structured_aliases | 0..* StructuredAlias |
A list of structured_alias objects, used to provide aliases in conjunction wi... | CommonMetadata |
mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have compa... | CommonMetadata |
exact_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have ident... | CommonMetadata |
close_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have close... | CommonMetadata |
related_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have relat... | CommonMetadata |
narrow_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have narro... | CommonMetadata |
broad_mappings | 0..* Uriorcurie |
A list of terms from different schemas or terminology systems that have broad... | CommonMetadata |
created_by | 0..1 Uriorcurie |
agent that created the element | CommonMetadata |
contributors | 0..* Uriorcurie |
agent that contributed to the element | CommonMetadata |
created_on | 0..1 Datetime |
time at which the element was created | CommonMetadata |
last_updated_on | 0..1 Datetime |
time at which the element was last updated | CommonMetadata |
modified_by | 0..1 Uriorcurie |
agent that modified the element | CommonMetadata |
status | 0..1 Uriorcurie |
status of the element | CommonMetadata |
rank | 0..1 Integer |
the relative order in which the element occurs, lower values are given preced... | CommonMetadata |
categories | 0..* Uriorcurie |
Controlled terms used to categorize an element | CommonMetadata |
keywords | 0..* String |
Keywords or tags used to describe the element | CommonMetadata |
Usages
used by | used in | type | used |
---|---|---|---|
SchemaDefinition | default_range | range | TypeDefinition |
SchemaDefinition | types | range | TypeDefinition |
TypeDefinition | typeof | domain | TypeDefinition |
TypeDefinition | typeof | range | TypeDefinition |
TypeDefinition | base | domain | TypeDefinition |
TypeDefinition | type_uri | domain | TypeDefinition |
TypeDefinition | repr | domain | TypeDefinition |
TypeDefinition | union_of | range | TypeDefinition |
TypeMapping | mapped_type | range | TypeDefinition |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/linkml/meta
Mappings
Mapping Type | Mapped Value |
---|---|
self | linkml:TypeDefinition |
native | linkml:TypeDefinition |
LinkML Source
Direct
name: type_definition
description: an element that whose instances are atomic scalar values that can be
mapped to primitive types
in_subset:
- SpecificationSubset
- BasicSubset
- OwlProfile
from_schema: https://w3id.org/linkml/meta
rank: 4
is_a: element
mixins:
- type_expression
slots:
- typeof
- base
- type_uri
- repr
- union_of
slot_usage:
union_of:
name: union_of
domain_of:
- type_definition
- slot_definition
- class_definition
range: type_definition
Induced
name: type_definition
description: an element that whose instances are atomic scalar values that can be
mapped to primitive types
in_subset:
- SpecificationSubset
- BasicSubset
- OwlProfile
from_schema: https://w3id.org/linkml/meta
rank: 4
is_a: element
mixins:
- type_expression
slot_usage:
union_of:
name: union_of
domain_of:
- type_definition
- slot_definition
- class_definition
range: type_definition
attributes:
typeof:
name: typeof
description: A parent type from which type properties are inherited
comments:
- the target type definition of the typeof slot is referred to as the "parent
type"
- the type definition containing the typeof slot is referred to as the "child
type"
- type definitions without a typeof slot are referred to as a "root type"
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 7
domain: type_definition
alias: typeof
owner: type_definition
domain_of:
- type_definition
range: type_definition
base:
name: base
description: python base type in the LinkML runtime that implements this type
definition
comments:
- every root type must have a base
- the base is inherited by child types but may be overridden. Base compatibility
is not checked.
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 8
domain: type_definition
inherited: true
alias: base
owner: type_definition
domain_of:
- type_definition
range: string
type_uri:
name: type_uri
description: The uri that defines the possible values for the type definition
comments:
- uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps)
- every root type must have a type uri
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 2
domain: type_definition
inherited: true
alias: uri
owner: type_definition
domain_of:
- type_definition
range: uriorcurie
repr:
name: repr
description: the name of the python object that implements this type definition
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 10
domain: type_definition
inherited: true
alias: repr
owner: type_definition
domain_of:
- type_definition
range: string
union_of:
name: union_of
description: indicates that the domain element consists exactly of the members
of the element in the range.
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
multivalued: true
alias: union_of
owner: type_definition
domain_of:
- type_definition
- slot_definition
- class_definition
range: type_definition
pattern:
name: pattern
description: the string value of the slot must conform to this regular expression
expressed in the string
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 35
domain: definition
inherited: true
alias: pattern
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: string
structured_pattern:
name: structured_pattern
description: the string value of the slot must conform to the regular expression
in the pattern expression
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://linkml.io/linkml/schemas/constraints.html#structured-patterns
rank: 1000
domain: definition
inherited: true
alias: structured_pattern
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: pattern_expression
unit:
name: unit
description: an encoding of a unit
from_schema: https://w3id.org/linkml/meta
rank: 1000
slot_uri: qudt:unit
alias: unit
owner: type_definition
domain_of:
- type_expression
- slot_expression
- permissible_value
range: UnitOfMeasure
implicit_prefix:
name: implicit_prefix
description: Causes the slot value to be interpreted as a uriorcurie after prefixing
with this string
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
domain: slot_expression
alias: implicit_prefix
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: string
equals_string:
name: equals_string
description: the slot must have range string and the value of the slot must equal
the specified value
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: equals_string
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: string
equals_string_in:
name: equals_string_in
description: the slot must have range string and the value of the slot must equal
one of the specified values
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
status: testing
rank: 1000
is_a: list_value_specification_constant
multivalued: true
inherited: true
alias: equals_string_in
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: string
equals_number:
name: equals_number
description: the slot must have range of a number and the value of the slot must
equal the specified value
from_schema: https://w3id.org/linkml/meta
status: unstable
rank: 1000
is_a: list_value_specification_constant
inherited: true
alias: equals_number
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: integer
minimum_value:
name: minimum_value
description: For ordinal ranges, the value must be equal to or higher than this
notes:
- Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- low value
rank: 1000
domain: slot_definition
inherited: true
alias: minimum_value
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: Anything
maximum_value:
name: maximum_value
description: For ordinal ranges, the value must be equal to or lower than this
notes:
- Range to be refined to an "Ordinal" metaclass - see https://github.com/linkml/linkml/issues/1384#issuecomment-1892721142
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- high value
rank: 1000
domain: slot_definition
inherited: true
alias: maximum_value
owner: type_definition
domain_of:
- type_expression
- slot_expression
range: Anything
none_of:
name: none_of
description: holds if none of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 105
is_a: boolean_slot
multivalued: true
alias: none_of
owner: type_definition
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_type_expression
exactly_one_of:
name: exactly_one_of
description: holds if only one of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 103
is_a: boolean_slot
multivalued: true
alias: exactly_one_of
owner: type_definition
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_type_expression
any_of:
name: any_of
description: holds if at least one of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 101
is_a: boolean_slot
multivalued: true
alias: any_of
owner: type_definition
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_type_expression
all_of:
name: all_of
description: holds if all of the expressions hold
from_schema: https://w3id.org/linkml/meta
rank: 107
is_a: boolean_slot
multivalued: true
alias: all_of
owner: type_definition
domain_of:
- type_expression
- path_expression
- slot_expression
- class_expression
range: anonymous_type_expression
name:
name: name
description: the unique name of the element within the context of the schema. Name
is combined with the default prefix to form the globally unique subject of the
target class.
in_subset:
- SpecificationSubset
- OwlProfile
- MinimalSubset
- BasicSubset
- RelationalModelProfile
- ObjectOrientedProfile
from_schema: https://w3id.org/linkml/meta
see_also:
- https://en.wikipedia.org/wiki/Data_element_name
- https://linkml.io/linkml/faq/modeling.html#why-are-my-class-names-translated-to-camelcase
aliases:
- short name
- unique name
exact_mappings:
- schema:name
rank: 1
domain: element
slot_uri: rdfs:label
identifier: true
alias: name
owner: type_definition
domain_of:
- element
range: string
required: true
id_prefixes:
name: id_prefixes
description: An allowed list of prefixes for which identifiers must conform. The
identifier of this class or slot must begin with the URIs referenced by this
prefix
comments:
- Order of elements may be used to indicate priority order
- If identifiers are treated as CURIEs, then the CURIE must start with one of
the indicated prefixes followed by `:` (_should_ start if the list is open)
- If identifiers are treated as URIs, then the URI string must start with the
expanded for of the prefix (_should_ start if the list is open)
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://github.com/linkml/linkml-model/issues/28
rank: 1000
domain: element
multivalued: true
alias: id_prefixes
owner: type_definition
domain_of:
- element
range: ncname
id_prefixes_are_closed:
name: id_prefixes_are_closed
description: If true, then the id_prefixes slot is treated as being closed, and
any use of an id that does not have this prefix is considered a violation.
from_schema: https://w3id.org/linkml/meta
see_also:
- https://github.com/linkml/linkml/issues/194
rank: 1000
domain: element
alias: id_prefixes_are_closed
owner: type_definition
domain_of:
- element
range: boolean
definition_uri:
name: definition_uri
description: The native URI of the element. This is always within the namespace
of the containing schema. Contrast with the assigned URI, via class_uri or slot_uri
comments:
- Formed by combining the default_prefix with the normalized element name
from_schema: https://w3id.org/linkml/meta
see_also:
- linkml:class_uri
- linkml:slot_uri
rank: 1000
domain: element
readonly: filled in by the schema loader or schema view
alias: definition_uri
owner: type_definition
domain_of:
- element
range: uriorcurie
local_names:
name: local_names
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
multivalued: true
alias: local_names
owner: type_definition
domain_of:
- element
range: local_name
inlined: true
conforms_to:
name: conforms_to
description: An established standard to which the element conforms.
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- linkml:implements
rank: 1000
domain: element
slot_uri: dcterms:conformsTo
alias: conforms_to
owner: type_definition
domain_of:
- element
range: string
implements:
name: implements
description: An element in another schema which this element conforms to. The
referenced element is not imported into the schema for the implementing element.
However, the referenced schema may be used to check conformance of the implementing
element.
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
multivalued: true
alias: implements
owner: type_definition
domain_of:
- element
- permissible_value
range: uriorcurie
instantiates:
name: instantiates
description: An element in another schema which this element instantiates.
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
multivalued: true
alias: instantiates
owner: type_definition
domain_of:
- element
- permissible_value
range: uriorcurie
extensions:
name: extensions
description: a tag/text tuple attached to an arbitrary element
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: extensible
multivalued: true
alias: extensions
owner: type_definition
domain_of:
- extension
- extensible
range: extension
inlined: true
annotations:
name: annotations
description: a collection of tag/text tuples with the semantics of OWL Annotation
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: extensions
domain: annotatable
multivalued: true
alias: annotations
owner: type_definition
domain_of:
- annotatable
- annotation
range: annotation
inlined: true
description:
name: description
description: a textual description of the element's purpose and use
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- definition
exact_mappings:
- dcterms:description
- schema:description
rank: 5
domain: element
slot_uri: skos:definition
alias: description
owner: type_definition
domain_of:
- common_metadata
- permissible_value
range: string
recommended: true
alt_descriptions:
name: alt_descriptions
description: A sourced alternative description for an element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- alternate definitions
rank: 1000
domain: element
multivalued: true
alias: alt_descriptions
owner: type_definition
domain_of:
- common_metadata
range: alt_description
inlined: true
title:
name: title
description: A concise human-readable display label for the element. The title
should mirror the name, and should use ordinary textual punctuation.
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- long name
rank: 3
domain: element
slot_uri: dcterms:title
alias: title
owner: type_definition
domain_of:
- common_metadata
range: string
deprecated:
name: deprecated
description: Description of why and when this element will no longer be used
comments:
- note that linkml does not use a boolean to indicate deprecation status - the
presence of a string value in this field is sufficient to indicate deprecation.
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
close_mappings:
- owl:deprecated
rank: 1000
domain: element
alias: deprecated
owner: type_definition
domain_of:
- common_metadata
range: string
todos:
name: todos
description: Outstanding issues that needs resolution
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
multivalued: true
alias: todos
owner: type_definition
domain_of:
- common_metadata
range: string
notes:
name: notes
description: editorial notes about an element intended primarily for internal
consumption
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: skos:editorialNote
multivalued: true
alias: notes
owner: type_definition
domain_of:
- common_metadata
range: string
comments:
name: comments
description: notes and comments about an element intended primarily for external
consumption
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
exact_mappings:
- rdfs:comment
rank: 1000
domain: element
slot_uri: skos:note
multivalued: true
alias: comments
owner: type_definition
domain_of:
- common_metadata
range: string
examples:
name: examples
description: example usages of an element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
close_mappings:
- vann:example
rank: 1000
singular_name: example
domain: element
multivalued: true
alias: examples
owner: type_definition
domain_of:
- common_metadata
range: example
inlined: true
in_subset:
name: in_subset
description: used to indicate membership of a term in a defined subset of terms
used for a particular domain or application.
comments:
- an example of use in the translator_minimal subset in the biolink model, holding
the minimal set of predicates used in a translator knowledge graph
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: OIO:inSubset
multivalued: true
alias: in_subset
owner: type_definition
domain_of:
- common_metadata
range: subset_definition
from_schema:
name: from_schema
description: id of the schema that defined the element
notes:
- A stronger model would be range schema_definition, but this doesn't address
the import model
in_subset:
- SpecificationSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: skos:inScheme
readonly: supplied by the schema loader or schema view
alias: from_schema
owner: type_definition
domain_of:
- common_metadata
range: uri
imported_from:
name: imported_from
description: the imports entry that this element was derived from. Empty means
primary source
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
readonly: supplied by the schema loader or schema view
alias: imported_from
owner: type_definition
domain_of:
- common_metadata
range: string
source:
name: source
description: A related resource from which the element is derived.
comments:
- The described resource may be derived from the related resource in whole or
in part
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- origin
- derived from
close_mappings:
- prov:wasDerivedFrom
- schema:isBasedOn
rank: 1000
domain: element
slot_uri: dcterms:source
alias: source
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
in_language:
name: in_language
conforms_to: https://www.rfc-editor.org/rfc/bcp/bcp47.txt
description: the primary language used in the sources
comments:
- Recommended to use a string from IETF BCP 47
from_schema: https://w3id.org/linkml/meta
rank: 1000
slot_uri: schema:inLanguage
alias: in_language
owner: type_definition
domain_of:
- common_metadata
range: string
see_also:
name: see_also
description: A list of related entities or URLs that may be of relevance
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: rdfs:seeAlso
multivalued: true
alias: see_also
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
deprecated element has exact replacement:
name: deprecated element has exact replacement
description: When an element is deprecated, it can be automatically replaced by
this uri or curie
from_schema: https://w3id.org/linkml/meta
mappings:
- IAO:0100001
rank: 1000
alias: deprecated_element_has_exact_replacement
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
deprecated element has possible replacement:
name: deprecated element has possible replacement
description: When an element is deprecated, it can be potentially replaced by
this uri or curie
from_schema: https://w3id.org/linkml/meta
mappings:
- OIO:consider
rank: 1000
alias: deprecated_element_has_possible_replacement
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
aliases:
name: aliases
description: Alternate names/labels for the element. These do not alter the semantics
of the schema, but may be useful to support search and alignment.
comments:
- not be confused with the metaslot alias.
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- synonyms
- alternate names
- alternative labels
- designations
exact_mappings:
- schema:alternateName
rank: 1000
domain: element
slot_uri: skos:altLabel
multivalued: true
alias: aliases
owner: type_definition
domain_of:
- common_metadata
range: string
structured_aliases:
name: structured_aliases
description: A list of structured_alias objects, used to provide aliases in conjunction
with additional metadata.
from_schema: https://w3id.org/linkml/meta
see_also:
- linkml:aliases
rank: 1000
slot_uri: skosxl:altLabel
multivalued: true
alias: structured_aliases
owner: type_definition
domain_of:
- common_metadata
range: structured_alias
inlined: true
mappings:
name: mappings
description: A list of terms from different schemas or terminology systems that
have comparable meaning. These may include terms that are precisely equivalent,
broader or narrower in meaning, or otherwise semantically related but not equivalent
from a strict ontological perspective.
from_schema: https://w3id.org/linkml/meta
aliases:
- xrefs
- identifiers
- alternate identifiers
- alternate ids
rank: 1000
slot_uri: skos:mappingRelation
multivalued: true
alias: mappings
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
exact mappings:
name: exact mappings
description: A list of terms from different schemas or terminology systems that
have identical meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:exactMatch
multivalued: true
inherited: false
alias: exact_mappings
owner: type_definition
domain_of:
- common_metadata
- UnitOfMeasure
range: uriorcurie
close mappings:
name: close mappings
description: A list of terms from different schemas or terminology systems that
have close meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:closeMatch
multivalued: true
inherited: false
alias: close_mappings
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
related mappings:
name: related mappings
description: A list of terms from different schemas or terminology systems that
have related meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:relatedMatch
multivalued: true
inherited: false
alias: related_mappings
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
narrow mappings:
name: narrow mappings
description: A list of terms from different schemas or terminology systems that
have narrower meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:narrowMatch
multivalued: true
inherited: false
alias: narrow_mappings
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
broad mappings:
name: broad mappings
description: A list of terms from different schemas or terminology systems that
have broader meaning.
from_schema: https://w3id.org/linkml/meta
rank: 1000
is_a: mappings
slot_uri: skos:broadMatch
multivalued: true
inherited: false
alias: broad_mappings
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
created_by:
name: created_by
description: agent that created the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: pav:createdBy
alias: created_by
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
contributors:
name: contributors
description: agent that contributed to the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: dcterms:contributor
multivalued: true
alias: contributors
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
created_on:
name: created_on
description: time at which the element was created
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: pav:createdOn
alias: created_on
owner: type_definition
domain_of:
- common_metadata
range: datetime
last_updated_on:
name: last_updated_on
description: time at which the element was last updated
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: pav:lastUpdatedOn
alias: last_updated_on
owner: type_definition
domain_of:
- common_metadata
range: datetime
modified_by:
name: modified_by
description: agent that modified the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
domain: element
slot_uri: oslc:modifiedBy
alias: modified_by
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
status:
name: status
description: status of the element
examples:
- value: bibo:draft
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
see_also:
- https://www.hl7.org/fhir/valueset-publication-status.html
- https://www.hl7.org/fhir/versions.html#std-process
aliases:
- workflow status
rank: 1000
domain: element
slot_uri: bibo:status
alias: status
owner: type_definition
domain_of:
- common_metadata
range: uriorcurie
rank:
name: rank
description: the relative order in which the element occurs, lower values are
given precedence
comments:
- the rank of an element does not affect the semantics
in_subset:
- SpecificationSubset
- BasicSubset
from_schema: https://w3id.org/linkml/meta
aliases:
- order
- precedence
- display order
exact_mappings:
- qudt:order
- qb:order
rank: 51
slot_uri: sh:order
alias: rank
owner: type_definition
domain_of:
- common_metadata
- class_rule
range: integer
categories:
name: categories
description: Controlled terms used to categorize an element.
comments:
- if you wish to use uncontrolled terms or terms that lack identifiers then use
the keywords element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
singular_name: category
slot_uri: dcterms:subject
multivalued: true
alias: categories
owner: type_definition
domain_of:
- common_metadata
- structured_alias
range: uriorcurie
keywords:
name: keywords
description: Keywords or tags used to describe the element
in_subset:
- BasicSubset
from_schema: https://w3id.org/linkml/meta
rank: 1000
singular_name: keyword
domain: element
slot_uri: schema:keywords
multivalued: true
alias: keywords
owner: type_definition
domain_of:
- common_metadata
range: string