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Class: SoilSample

A sample of soil

URI: linkml_tutorial_2024:SoilSample

classDiagram class SoilSample click SoilSample href "../SoilSample" Sample <|-- SoilSample click Sample href "../Sample" SoilSample : depth SoilSample : id SoilSample : latitude SoilSample : longitude SoilSample : sample_biome SoilSample --> "0..1" BiomeTypeEnum : sample_biome click BiomeTypeEnum href "../BiomeTypeEnum" SoilSample : sample_type SoilSample : species SoilSample --> "*" SpeciesEnum : species click SpeciesEnum href "../SpeciesEnum"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
depth 0..1
Integer		 The depth in centimeters of the biosample direct
id 1
String		 The unique identifier for the biosample Sample
latitude 0..1
Float		 Latitude is a geographic coordinate which refers to the angle from a point on... Sample
longitude 0..1
Float		 Longitude is a geographic position that refers to the angle east or west of a... Sample
species *
SpeciesEnum		 The species of micro organisms collected in the sample Sample
sample_biome 0..1
BiomeTypeEnum		 The biome type of the biosample Sample
sample_type 0..1
String		 The type of sample Sample

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/linkml/linkml-tutorial-2024

Mappings

Mapping Type Mapped Value
self linkml_tutorial_2024:SoilSample
native linkml_tutorial_2024:SoilSample

LinkML Source

Direct

name: SoilSample
description: A sample of soil
from_schema: https://w3id.org/linkml/linkml-tutorial-2024
is_a: Sample
slots:
- depth
slot_usage:
  id:
    name: id
    domain_of:
    - Sample
    pattern: ^soilsample:\d*

Induced

name: SoilSample
description: A sample of soil
from_schema: https://w3id.org/linkml/linkml-tutorial-2024
is_a: Sample
slot_usage:
  id:
    name: id
    domain_of:
    - Sample
    pattern: ^soilsample:\d*
attributes:
  depth:
    name: depth
    description: The depth in centimeters of the biosample.
    from_schema: https://w3id.org/linkml/linkml-tutorial-2024
    rank: 1000
    alias: depth
    owner: SoilSample
    domain_of:
    - SoilSample
    range: integer
  id:
    name: id
    description: The unique identifier for the biosample.
    from_schema: https://w3id.org/linkml/linkml-tutorial-2024
    rank: 1000
    identifier: true
    alias: id
    owner: SoilSample
    domain_of:
    - Sample
    range: string
    required: true
    pattern: ^soilsample:\d*
  latitude:
    name: latitude
    description: Latitude is a geographic coordinate which refers to the angle from
      a point on the Earth's surface to the  equatorial plane.
    from_schema: https://w3id.org/linkml/linkml-tutorial-2024
    rank: 1000
    slot_uri: schema:latitude
    alias: latitude
    owner: SoilSample
    domain_of:
    - Sample
    range: float
    minimum_value: -90
    maximum_value: 90
  longitude:
    name: longitude
    description: Longitude is a geographic position that refers to the angle east
      or west of a reference meridian between the  two geographical poles to another
      meridian that passes through an arbitrary point.
    from_schema: https://w3id.org/linkml/linkml-tutorial-2024
    rank: 1000
    slot_uri: schema:longitude
    alias: longitude
    owner: SoilSample
    domain_of:
    - Sample
    range: float
  species:
    name: species
    description: The species of micro organisms collected in the sample.
    from_schema: https://w3id.org/linkml/linkml-tutorial-2024
    rank: 1000
    multivalued: true
    alias: species
    owner: SoilSample
    domain_of:
    - Sample
    range: SpeciesEnum
  sample_biome:
    name: sample_biome
    description: The biome type of the biosample
    from_schema: https://w3id.org/linkml/linkml-tutorial-2024
    rank: 1000
    alias: sample_biome
    owner: SoilSample
    domain_of:
    - Sample
    range: BiomeTypeEnum
  sample_type:
    name: sample_type
    description: The type of sample.
    from_schema: https://w3id.org/linkml/linkml-tutorial-2024
    rank: 1000
    designates_type: true
    alias: sample_type
    owner: SoilSample
    domain_of:
    - Sample
    range: string