Enum: AminoAcidEnum
Standard amino acid single letter codes
URI: valuesets:AminoAcidEnum
Permissible Values
| Value |
Meaning |
Description |
| A |
CHEBI:16449 |
|
| C |
CHEBI:17561 |
|
| D |
CHEBI:17053 |
|
| E |
CHEBI:16015 |
|
| F |
CHEBI:17295 |
|
| G |
CHEBI:15428 |
|
| H |
CHEBI:15971 |
|
| I |
CHEBI:17191 |
|
| K |
CHEBI:18019 |
|
| L |
CHEBI:15603 |
|
| M |
CHEBI:16643 |
|
| N |
CHEBI:17196 |
|
| P |
CHEBI:17203 |
|
| Q |
CHEBI:18050 |
|
| R |
CHEBI:16467 |
|
| S |
CHEBI:17115 |
|
| T |
CHEBI:16857 |
|
| V |
CHEBI:16414 |
|
| W |
CHEBI:16828 |
|
| Y |
CHEBI:17895 |
|
Slots
| Name |
Description |
| amino_acid |
Standard amino acid single letter codes |
Schema Source
- from schema: https://w3id.org/linkml/valuesets
LinkML Source
name: AminoAcidEnum
description: Standard amino acid single letter codes
from_schema: https://w3id.org/linkml/valuesets
rank: 1000
permissible_values:
A:
text: A
meaning: CHEBI:16449
annotations:
three_letter:
tag: three_letter
value: Ala
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '89.09'
title: Alanine
aliases:
- alanine
C:
text: C
meaning: CHEBI:17561
annotations:
three_letter:
tag: three_letter
value: Cys
polarity:
tag: polarity
value: polar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '121.15'
special:
tag: special
value: forms disulfide bonds
title: Cysteine
aliases:
- L-cysteine
D:
text: D
meaning: CHEBI:17053
annotations:
three_letter:
tag: three_letter
value: Asp
polarity:
tag: polarity
value: acidic
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '133.10'
charge:
tag: charge
value: negative
title: Aspartic acid
aliases:
- L-aspartic acid
E:
text: E
meaning: CHEBI:16015
annotations:
three_letter:
tag: three_letter
value: Glu
polarity:
tag: polarity
value: acidic
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '147.13'
charge:
tag: charge
value: negative
title: Glutamic acid
aliases:
- L-glutamic acid
F:
text: F
meaning: CHEBI:17295
annotations:
three_letter:
tag: three_letter
value: Phe
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '165.19'
aromatic:
tag: aromatic
value: 'true'
title: Phenylalanine
aliases:
- L-phenylalanine
G:
text: G
meaning: CHEBI:15428
annotations:
three_letter:
tag: three_letter
value: Gly
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '75.07'
special:
tag: special
value: smallest, most flexible
title: Glycine
aliases:
- glycine
H:
text: H
meaning: CHEBI:15971
annotations:
three_letter:
tag: three_letter
value: His
polarity:
tag: polarity
value: basic
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '155.16'
charge:
tag: charge
value: positive
title: Histidine
aliases:
- L-histidine
I:
text: I
meaning: CHEBI:17191
annotations:
three_letter:
tag: three_letter
value: Ile
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '131.17'
branched:
tag: branched
value: 'true'
title: Isoleucine
aliases:
- L-isoleucine
K:
text: K
meaning: CHEBI:18019
annotations:
three_letter:
tag: three_letter
value: Lys
polarity:
tag: polarity
value: basic
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '146.19'
charge:
tag: charge
value: positive
title: Lysine
aliases:
- L-lysine
L:
text: L
meaning: CHEBI:15603
annotations:
three_letter:
tag: three_letter
value: Leu
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '131.17'
branched:
tag: branched
value: 'true'
title: Leucine
aliases:
- L-leucine
M:
text: M
meaning: CHEBI:16643
annotations:
three_letter:
tag: three_letter
value: Met
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '149.21'
special:
tag: special
value: start codon
title: Methionine
aliases:
- L-methionine
N:
text: N
meaning: CHEBI:17196
annotations:
three_letter:
tag: three_letter
value: Asn
polarity:
tag: polarity
value: polar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '132.12'
title: Asparagine
aliases:
- L-asparagine
P:
text: P
meaning: CHEBI:17203
annotations:
three_letter:
tag: three_letter
value: Pro
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '115.13'
special:
tag: special
value: helix breaker, rigid
title: Proline
aliases:
- L-proline
Q:
text: Q
meaning: CHEBI:18050
annotations:
three_letter:
tag: three_letter
value: Gln
polarity:
tag: polarity
value: polar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '146.15'
title: Glutamine
aliases:
- L-glutamine
R:
text: R
meaning: CHEBI:16467
annotations:
three_letter:
tag: three_letter
value: Arg
polarity:
tag: polarity
value: basic
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '174.20'
charge:
tag: charge
value: positive
title: Arginine
aliases:
- L-arginine
S:
text: S
meaning: CHEBI:17115
annotations:
three_letter:
tag: three_letter
value: Ser
polarity:
tag: polarity
value: polar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '105.09'
hydroxyl:
tag: hydroxyl
value: 'true'
title: Serine
aliases:
- L-serine
T:
text: T
meaning: CHEBI:16857
annotations:
three_letter:
tag: three_letter
value: Thr
polarity:
tag: polarity
value: polar
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '119.12'
hydroxyl:
tag: hydroxyl
value: 'true'
title: Threonine
aliases:
- L-threonine
V:
text: V
meaning: CHEBI:16414
annotations:
three_letter:
tag: three_letter
value: Val
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '117.15'
branched:
tag: branched
value: 'true'
title: Valine
aliases:
- L-valine
W:
text: W
meaning: CHEBI:16828
annotations:
three_letter:
tag: three_letter
value: Trp
polarity:
tag: polarity
value: nonpolar
essential:
tag: essential
value: 'true'
molecular_weight:
tag: molecular_weight
value: '204.23'
aromatic:
tag: aromatic
value: 'true'
special:
tag: special
value: largest
title: Tryptophan
aliases:
- L-tryptophan
Y:
text: Y
meaning: CHEBI:17895
annotations:
three_letter:
tag: three_letter
value: Tyr
polarity:
tag: polarity
value: polar
essential:
tag: essential
value: 'false'
molecular_weight:
tag: molecular_weight
value: '181.19'
aromatic:
tag: aromatic
value: 'true'
hydroxyl:
tag: hydroxyl
value: 'true'
title: Tyrosine
aliases:
- L-tyrosine