Enum: CElegansChromosome

Nuclear and mitochondrial chromosomes of Caenorhabditis elegans (C. elegans), as represented in the Monochrom Ontology (CHR). Sequence lengths and accessions are from the UCSC ce11 assembly.

URI: valuesets:CElegansChromosome

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Permissible Values

Value	Title	Meaning	Description	Length Bp	Refseq Accession
CHRI	I	CHR:6239-chrI	chromosome I (C elegans)	15072434	NC_003279.8
CHRII	II	CHR:6239-chrII	chromosome II (C elegans)	15279421	NC_003280.10
CHRIII	III	CHR:6239-chrIII	chromosome III (C elegans)	13783801	NC_003281.10
CHRIV	IV	CHR:6239-chrIV	chromosome IV (C elegans)	17493829	NC_003282.8
CHRV	V	CHR:6239-chrV	chromosome V (C elegans)	20924180	NC_003283.11
CHRX	X	CHR:6239-chrX	chromosome X (C elegans)	17718942	NC_003284.9
CHRM	M	CHR:6239-chrM	chromosome M (C elegans)	13794	NC_001328.1

Identifier and Mapping Information

Annotations

property	value
source_ontology	http://purl.obolibrary.org/obo/chr.owl
taxon	NCBITaxon:6239

Schema Source

• from schema: https://w3id.org/valuesets

LinkML Source

name: CElegansChromosome
instantiates:
- valuesets_meta:ValueSetEnumDefinition
annotations:
  source_ontology:
    tag: source_ontology
    value: http://purl.obolibrary.org/obo/chr.owl
  taxon:
    tag: taxon
    value: NCBITaxon:6239
description: Nuclear and mitochondrial chromosomes of Caenorhabditis elegans (C. elegans),
  as represented in the Monochrom Ontology (CHR). Sequence lengths and accessions
  are from the UCSC ce11 assembly.
title: Caenorhabditis elegans Chromosome
from_schema: https://w3id.org/valuesets
contributors:
- orcid:0000-0002-6601-2165
- https://github.com/anthropics/claude-code
status: DRAFT
rank: 1000
permissible_values:
  CHRI:
    text: CHRI
    description: chromosome I (C elegans)
    meaning: CHR:6239-chrI
    annotations:
      refseq_accession:
        tag: refseq_accession
        value: NC_003279.8
      length_bp:
        tag: length_bp
        value: 15072434
    title: I
    aliases:
    - chrI
  CHRII:
    text: CHRII
    description: chromosome II (C elegans)
    meaning: CHR:6239-chrII
    annotations:
      refseq_accession:
        tag: refseq_accession
        value: NC_003280.10
      length_bp:
        tag: length_bp
        value: 15279421
    title: II
    aliases:
    - chrII
  CHRIII:
    text: CHRIII
    description: chromosome III (C elegans)
    meaning: CHR:6239-chrIII
    annotations:
      refseq_accession:
        tag: refseq_accession
        value: NC_003281.10
      length_bp:
        tag: length_bp
        value: 13783801
    title: III
    aliases:
    - chrIII
  CHRIV:
    text: CHRIV
    description: chromosome IV (C elegans)
    meaning: CHR:6239-chrIV
    annotations:
      refseq_accession:
        tag: refseq_accession
        value: NC_003282.8
      length_bp:
        tag: length_bp
        value: 17493829
    title: IV
    aliases:
    - chrIV
  CHRV:
    text: CHRV
    description: chromosome V (C elegans)
    meaning: CHR:6239-chrV
    annotations:
      refseq_accession:
        tag: refseq_accession
        value: NC_003283.11
      length_bp:
        tag: length_bp
        value: 20924180
    title: V
    aliases:
    - chrV
  CHRX:
    text: CHRX
    description: chromosome X (C elegans)
    meaning: CHR:6239-chrX
    annotations:
      refseq_accession:
        tag: refseq_accession
        value: NC_003284.9
      length_bp:
        tag: length_bp
        value: 17718942
    title: X
    aliases:
    - chrX
  CHRM:
    text: CHRM
    description: chromosome M (C elegans)
    meaning: CHR:6239-chrM
    annotations:
      refseq_accession:
        tag: refseq_accession
        value: NC_001328.1
      length_bp:
        tag: length_bp
        value: 13794
    title: M
    aliases:
    - chrM
    - MT
    - chrMT