Enum: CodonEnum

Standard genetic code codons (DNA)

URI: valuesets:CodonEnum

Permissible Values

Value	Meaning	Description
TTT	None
TTC	None
TTA	None
TTG	None
CTT	None
CTC	None
CTA	None
CTG	None
ATT	None
ATC	None
ATA	None
ATG	None
GTT	None
GTC	None
GTA	None
GTG	None
TCT	None
TCC	None
TCA	None
TCG	None
AGT	None
AGC	None
CCT	None
CCC	None
CCA	None
CCG	None
ACT	None
ACC	None
ACA	None
ACG	None
GCT	None
GCC	None
GCA	None
GCG	None
TAT	None
TAC	None
TAA	None
TAG	None
TGA	None
CAT	None
CAC	None
CAA	None
CAG	None
AAT	None
AAC	None
AAA	None
AAG	None
GAT	None
GAC	None
GAA	None
GAG	None
TGT	None
TGC	None
TGG	None
CGT	None
CGC	None
CGA	None
CGG	None
AGA	None
AGG	None
GGT	None
GGC	None
GGA	None
GGG	None

Slots

Name	Description
codon	Standard genetic code codons (DNA)

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: CodonEnum
description: Standard genetic code codons (DNA)
from_schema: https://w3id.org/linkml/valuesets
rank: 1000
permissible_values:
  TTT:
    text: TTT
    annotations:
      amino_acid:
        tag: amino_acid
        value: F
      amino_acid_name:
        tag: amino_acid_name
        value: Phenylalanine
    title: Phenylalanine codon
  TTC:
    text: TTC
    annotations:
      amino_acid:
        tag: amino_acid
        value: F
      amino_acid_name:
        tag: amino_acid_name
        value: Phenylalanine
    title: Phenylalanine codon
  TTA:
    text: TTA
    annotations:
      amino_acid:
        tag: amino_acid
        value: L
      amino_acid_name:
        tag: amino_acid_name
        value: Leucine
    title: Leucine codon
  TTG:
    text: TTG
    annotations:
      amino_acid:
        tag: amino_acid
        value: L
      amino_acid_name:
        tag: amino_acid_name
        value: Leucine
    title: Leucine codon
  CTT:
    text: CTT
    annotations:
      amino_acid:
        tag: amino_acid
        value: L
      amino_acid_name:
        tag: amino_acid_name
        value: Leucine
    title: Leucine codon
  CTC:
    text: CTC
    annotations:
      amino_acid:
        tag: amino_acid
        value: L
      amino_acid_name:
        tag: amino_acid_name
        value: Leucine
    title: Leucine codon
  CTA:
    text: CTA
    annotations:
      amino_acid:
        tag: amino_acid
        value: L
      amino_acid_name:
        tag: amino_acid_name
        value: Leucine
    title: Leucine codon
  CTG:
    text: CTG
    annotations:
      amino_acid:
        tag: amino_acid
        value: L
      amino_acid_name:
        tag: amino_acid_name
        value: Leucine
    title: Leucine codon
  ATT:
    text: ATT
    annotations:
      amino_acid:
        tag: amino_acid
        value: I
      amino_acid_name:
        tag: amino_acid_name
        value: Isoleucine
    title: Isoleucine codon
  ATC:
    text: ATC
    annotations:
      amino_acid:
        tag: amino_acid
        value: I
      amino_acid_name:
        tag: amino_acid_name
        value: Isoleucine
    title: Isoleucine codon
  ATA:
    text: ATA
    annotations:
      amino_acid:
        tag: amino_acid
        value: I
      amino_acid_name:
        tag: amino_acid_name
        value: Isoleucine
    title: Isoleucine codon
  ATG:
    text: ATG
    annotations:
      amino_acid:
        tag: amino_acid
        value: M
      amino_acid_name:
        tag: amino_acid_name
        value: Methionine
      special:
        tag: special
        value: start codon
    title: Methionine codon (start codon)
  GTT:
    text: GTT
    annotations:
      amino_acid:
        tag: amino_acid
        value: V
      amino_acid_name:
        tag: amino_acid_name
        value: Valine
    title: Valine codon
  GTC:
    text: GTC
    annotations:
      amino_acid:
        tag: amino_acid
        value: V
      amino_acid_name:
        tag: amino_acid_name
        value: Valine
    title: Valine codon
  GTA:
    text: GTA
    annotations:
      amino_acid:
        tag: amino_acid
        value: V
      amino_acid_name:
        tag: amino_acid_name
        value: Valine
    title: Valine codon
  GTG:
    text: GTG
    annotations:
      amino_acid:
        tag: amino_acid
        value: V
      amino_acid_name:
        tag: amino_acid_name
        value: Valine
    title: Valine codon
  TCT:
    text: TCT
    annotations:
      amino_acid:
        tag: amino_acid
        value: S
      amino_acid_name:
        tag: amino_acid_name
        value: Serine
    title: Serine codon
  TCC:
    text: TCC
    annotations:
      amino_acid:
        tag: amino_acid
        value: S
      amino_acid_name:
        tag: amino_acid_name
        value: Serine
    title: Serine codon
  TCA:
    text: TCA
    annotations:
      amino_acid:
        tag: amino_acid
        value: S
      amino_acid_name:
        tag: amino_acid_name
        value: Serine
    title: Serine codon
  TCG:
    text: TCG
    annotations:
      amino_acid:
        tag: amino_acid
        value: S
      amino_acid_name:
        tag: amino_acid_name
        value: Serine
    title: Serine codon
  AGT:
    text: AGT
    annotations:
      amino_acid:
        tag: amino_acid
        value: S
      amino_acid_name:
        tag: amino_acid_name
        value: Serine
    title: Serine codon
  AGC:
    text: AGC
    annotations:
      amino_acid:
        tag: amino_acid
        value: S
      amino_acid_name:
        tag: amino_acid_name
        value: Serine
    title: Serine codon
  CCT:
    text: CCT
    annotations:
      amino_acid:
        tag: amino_acid
        value: P
      amino_acid_name:
        tag: amino_acid_name
        value: Proline
    title: Proline codon
  CCC:
    text: CCC
    annotations:
      amino_acid:
        tag: amino_acid
        value: P
      amino_acid_name:
        tag: amino_acid_name
        value: Proline
    title: Proline codon
  CCA:
    text: CCA
    annotations:
      amino_acid:
        tag: amino_acid
        value: P
      amino_acid_name:
        tag: amino_acid_name
        value: Proline
    title: Proline codon
  CCG:
    text: CCG
    annotations:
      amino_acid:
        tag: amino_acid
        value: P
      amino_acid_name:
        tag: amino_acid_name
        value: Proline
    title: Proline codon
  ACT:
    text: ACT
    annotations:
      amino_acid:
        tag: amino_acid
        value: T
      amino_acid_name:
        tag: amino_acid_name
        value: Threonine
    title: Threonine codon
  ACC:
    text: ACC
    annotations:
      amino_acid:
        tag: amino_acid
        value: T
      amino_acid_name:
        tag: amino_acid_name
        value: Threonine
    title: Threonine codon
  ACA:
    text: ACA
    annotations:
      amino_acid:
        tag: amino_acid
        value: T
      amino_acid_name:
        tag: amino_acid_name
        value: Threonine
    title: Threonine codon
  ACG:
    text: ACG
    annotations:
      amino_acid:
        tag: amino_acid
        value: T
      amino_acid_name:
        tag: amino_acid_name
        value: Threonine
    title: Threonine codon
  GCT:
    text: GCT
    annotations:
      amino_acid:
        tag: amino_acid
        value: A
      amino_acid_name:
        tag: amino_acid_name
        value: Alanine
    title: Alanine codon
  GCC:
    text: GCC
    annotations:
      amino_acid:
        tag: amino_acid
        value: A
      amino_acid_name:
        tag: amino_acid_name
        value: Alanine
    title: Alanine codon
  GCA:
    text: GCA
    annotations:
      amino_acid:
        tag: amino_acid
        value: A
      amino_acid_name:
        tag: amino_acid_name
        value: Alanine
    title: Alanine codon
  GCG:
    text: GCG
    annotations:
      amino_acid:
        tag: amino_acid
        value: A
      amino_acid_name:
        tag: amino_acid_name
        value: Alanine
    title: Alanine codon
  TAT:
    text: TAT
    annotations:
      amino_acid:
        tag: amino_acid
        value: Y
      amino_acid_name:
        tag: amino_acid_name
        value: Tyrosine
    title: Tyrosine codon
  TAC:
    text: TAC
    annotations:
      amino_acid:
        tag: amino_acid
        value: Y
      amino_acid_name:
        tag: amino_acid_name
        value: Tyrosine
    title: Tyrosine codon
  TAA:
    text: TAA
    annotations:
      amino_acid:
        tag: amino_acid
        value: '*'
      name:
        tag: name
        value: ochre
      special:
        tag: special
        value: stop codon
    title: Stop codon (ochre)
  TAG:
    text: TAG
    annotations:
      amino_acid:
        tag: amino_acid
        value: '*'
      name:
        tag: name
        value: amber
      special:
        tag: special
        value: stop codon
    title: Stop codon (amber)
  TGA:
    text: TGA
    annotations:
      amino_acid:
        tag: amino_acid
        value: '*'
      name:
        tag: name
        value: opal
      special:
        tag: special
        value: stop codon or selenocysteine
    title: Stop codon (opal/umber)
  CAT:
    text: CAT
    annotations:
      amino_acid:
        tag: amino_acid
        value: H
      amino_acid_name:
        tag: amino_acid_name
        value: Histidine
    title: Histidine codon
  CAC:
    text: CAC
    annotations:
      amino_acid:
        tag: amino_acid
        value: H
      amino_acid_name:
        tag: amino_acid_name
        value: Histidine
    title: Histidine codon
  CAA:
    text: CAA
    annotations:
      amino_acid:
        tag: amino_acid
        value: Q
      amino_acid_name:
        tag: amino_acid_name
        value: Glutamine
    title: Glutamine codon
  CAG:
    text: CAG
    annotations:
      amino_acid:
        tag: amino_acid
        value: Q
      amino_acid_name:
        tag: amino_acid_name
        value: Glutamine
    title: Glutamine codon
  AAT:
    text: AAT
    annotations:
      amino_acid:
        tag: amino_acid
        value: N
      amino_acid_name:
        tag: amino_acid_name
        value: Asparagine
    title: Asparagine codon
  AAC:
    text: AAC
    annotations:
      amino_acid:
        tag: amino_acid
        value: N
      amino_acid_name:
        tag: amino_acid_name
        value: Asparagine
    title: Asparagine codon
  AAA:
    text: AAA
    annotations:
      amino_acid:
        tag: amino_acid
        value: K
      amino_acid_name:
        tag: amino_acid_name
        value: Lysine
    title: Lysine codon
  AAG:
    text: AAG
    annotations:
      amino_acid:
        tag: amino_acid
        value: K
      amino_acid_name:
        tag: amino_acid_name
        value: Lysine
    title: Lysine codon
  GAT:
    text: GAT
    annotations:
      amino_acid:
        tag: amino_acid
        value: D
      amino_acid_name:
        tag: amino_acid_name
        value: Aspartic acid
    title: Aspartic acid codon
  GAC:
    text: GAC
    annotations:
      amino_acid:
        tag: amino_acid
        value: D
      amino_acid_name:
        tag: amino_acid_name
        value: Aspartic acid
    title: Aspartic acid codon
  GAA:
    text: GAA
    annotations:
      amino_acid:
        tag: amino_acid
        value: E
      amino_acid_name:
        tag: amino_acid_name
        value: Glutamic acid
    title: Glutamic acid codon
  GAG:
    text: GAG
    annotations:
      amino_acid:
        tag: amino_acid
        value: E
      amino_acid_name:
        tag: amino_acid_name
        value: Glutamic acid
    title: Glutamic acid codon
  TGT:
    text: TGT
    annotations:
      amino_acid:
        tag: amino_acid
        value: C
      amino_acid_name:
        tag: amino_acid_name
        value: Cysteine
    title: Cysteine codon
  TGC:
    text: TGC
    annotations:
      amino_acid:
        tag: amino_acid
        value: C
      amino_acid_name:
        tag: amino_acid_name
        value: Cysteine
    title: Cysteine codon
  TGG:
    text: TGG
    annotations:
      amino_acid:
        tag: amino_acid
        value: W
      amino_acid_name:
        tag: amino_acid_name
        value: Tryptophan
    title: Tryptophan codon
  CGT:
    text: CGT
    annotations:
      amino_acid:
        tag: amino_acid
        value: R
      amino_acid_name:
        tag: amino_acid_name
        value: Arginine
    title: Arginine codon
  CGC:
    text: CGC
    annotations:
      amino_acid:
        tag: amino_acid
        value: R
      amino_acid_name:
        tag: amino_acid_name
        value: Arginine
    title: Arginine codon
  CGA:
    text: CGA
    annotations:
      amino_acid:
        tag: amino_acid
        value: R
      amino_acid_name:
        tag: amino_acid_name
        value: Arginine
    title: Arginine codon
  CGG:
    text: CGG
    annotations:
      amino_acid:
        tag: amino_acid
        value: R
      amino_acid_name:
        tag: amino_acid_name
        value: Arginine
    title: Arginine codon
  AGA:
    text: AGA
    annotations:
      amino_acid:
        tag: amino_acid
        value: R
      amino_acid_name:
        tag: amino_acid_name
        value: Arginine
    title: Arginine codon
  AGG:
    text: AGG
    annotations:
      amino_acid:
        tag: amino_acid
        value: R
      amino_acid_name:
        tag: amino_acid_name
        value: Arginine
    title: Arginine codon
  GGT:
    text: GGT
    annotations:
      amino_acid:
        tag: amino_acid
        value: G
      amino_acid_name:
        tag: amino_acid_name
        value: Glycine
    title: Glycine codon
  GGC:
    text: GGC
    annotations:
      amino_acid:
        tag: amino_acid
        value: G
      amino_acid_name:
        tag: amino_acid_name
        value: Glycine
    title: Glycine codon
  GGA:
    text: GGA
    annotations:
      amino_acid:
        tag: amino_acid
        value: G
      amino_acid_name:
        tag: amino_acid_name
        value: Glycine
    title: Glycine codon
  GGG:
    text: GGG
    annotations:
      amino_acid:
        tag: amino_acid
        value: G
      amino_acid_name:
        tag: amino_acid_name
        value: Glycine
    title: Glycine codon