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Enum: DataType

Types of structural biology data

URI: valuesets:DataType

Permissible Values

Value Meaning Description Applications Format Formats Information Resolution Typical Size
MICROGRAPH Electron micrograph image 4k x 4k pixels
MOVIE Movie stack of frames motion correction, dose fractionation
DIFFRACTION X-ray diffraction pattern structure factors, crystal lattice
SCATTERING Small-angle scattering data I(q) vs scattering vector
PARTICLES Particle stack for single particle analysis boxed particles, aligned
VOLUME 3D electron density volume cryo-EM maps, crystallographic maps
TOMOGRAM 3D tomographic reconstruction 5-50 Å typical
MODEL Atomic coordinate model PDB, mmCIF
METADATA Associated metadata file STAR, XML, JSON

Slots

Name Description
data Types of structural biology data

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: DataType
instantiates:
- valuesets_meta:ValueSetEnumDefinition
description: Types of structural biology data
title: Data Type
from_schema: https://w3id.org/linkml/valuesets
contributors:
- orcid:0000-0002-6601-2165
- https://github.com/anthropics/claude-code
status: DRAFT
rank: 1000
permissible_values:
  MICROGRAPH:
    text: MICROGRAPH
    description: Electron micrograph image
    annotations:
      typical_size:
        tag: typical_size
        value: 4k x 4k pixels
  MOVIE:
    text: MOVIE
    description: Movie stack of frames
    annotations:
      applications:
        tag: applications
        value: motion correction, dose fractionation
  DIFFRACTION:
    text: DIFFRACTION
    description: X-ray diffraction pattern
    annotations:
      information:
        tag: information
        value: structure factors, crystal lattice
  SCATTERING:
    text: SCATTERING
    description: Small-angle scattering data
    annotations:
      information:
        tag: information
        value: I(q) vs scattering vector
  PARTICLES:
    text: PARTICLES
    description: Particle stack for single particle analysis
    annotations:
      format:
        tag: format
        value: boxed particles, aligned
  VOLUME:
    text: VOLUME
    description: 3D electron density volume
    annotations:
      applications:
        tag: applications
        value: cryo-EM maps, crystallographic maps
  TOMOGRAM:
    text: TOMOGRAM
    description: 3D tomographic reconstruction
    annotations:
      resolution:
        tag: resolution
        value: 5-50 Å typical
  MODEL:
    text: MODEL
    description: Atomic coordinate model
    annotations:
      formats:
        tag: formats
        value: PDB, mmCIF
  METADATA:
    text: METADATA
    description: Associated metadata file
    annotations:
      formats:
        tag: formats
        value: STAR, XML, JSON