Enum: DataType

Types of structural biology data

Permissible Values

Value	Meaning	Description
MICROGRAPH	None	Electron micrograph image
MOVIE	None	Movie stack of frames
DIFFRACTION	None	X-ray diffraction pattern
SCATTERING	None	Small-angle scattering data
PARTICLES	None	Particle stack for single particle analysis
VOLUME	None	3D electron density volume
TOMOGRAM	None	3D tomographic reconstruction
MODEL	None	Atomic coordinate model
METADATA	None	Associated metadata file

Slots

Name	Description
data	Types of structural biology data

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: DataType
description: Types of structural biology data
from_schema: https://w3id.org/linkml/valuesets
rank: 1000
permissible_values:
  MICROGRAPH:
    text: MICROGRAPH
    description: Electron micrograph image
    annotations:
      typical_size:
        tag: typical_size
        value: 4k x 4k pixels
  MOVIE:
    text: MOVIE
    description: Movie stack of frames
    annotations:
      applications:
        tag: applications
        value: motion correction, dose fractionation
  DIFFRACTION:
    text: DIFFRACTION
    description: X-ray diffraction pattern
    annotations:
      information:
        tag: information
        value: structure factors, crystal lattice
  SCATTERING:
    text: SCATTERING
    description: Small-angle scattering data
    annotations:
      information:
        tag: information
        value: I(q) vs scattering vector
  PARTICLES:
    text: PARTICLES
    description: Particle stack for single particle analysis
    annotations:
      format:
        tag: format
        value: boxed particles, aligned
  VOLUME:
    text: VOLUME
    description: 3D electron density volume
    annotations:
      applications:
        tag: applications
        value: cryo-EM maps, crystallographic maps
  TOMOGRAM:
    text: TOMOGRAM
    description: 3D tomographic reconstruction
    annotations:
      resolution:
        tag: resolution
        value: 5-50 Å typical
  MODEL:
    text: MODEL
    description: Atomic coordinate model
    annotations:
      formats:
        tag: formats
        value: PDB, mmCIF
  METADATA:
    text: METADATA
    description: Associated metadata file
    annotations:
      formats:
        tag: formats
        value: STAR, XML, JSON