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Enum: InteractorType

Types of molecular species in interactions

URI: valuesets:InteractorType

Permissible Values

Value Meaning Description
PROTEIN MI:0326 Polypeptide molecule
PEPTIDE MI:0327 Short polypeptide
SMALL_MOLECULE MI:0328 Small chemical compound
DNA MI:0319 Deoxyribonucleic acid
RNA MI:0320 Ribonucleic acid
PROTEIN_COMPLEX MI:0314 Multi-protein assembly
GENE MI:0250 Gene locus
BIOPOLYMER MI:0383 Biological polymer
POLYSACCHARIDE MI:0904 Carbohydrate polymer
LIPID None Lipid molecule
NUCLEIC_ACID MI:0318 DNA or RNA
SYNTHETIC_POLYMER None Artificial polymer
METAL_ION None Metal ion cofactor

Slots

Name Description
interactor Types of molecular species in interactions

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: InteractorType
description: Types of molecular species in interactions
title: Interactor Type
from_schema: https://w3id.org/linkml/valuesets
rank: 1000
permissible_values:
  PROTEIN:
    text: PROTEIN
    description: Polypeptide molecule
    meaning: MI:0326
  PEPTIDE:
    text: PEPTIDE
    description: Short polypeptide
    meaning: MI:0327
  SMALL_MOLECULE:
    text: SMALL_MOLECULE
    description: Small chemical compound
    meaning: MI:0328
  DNA:
    text: DNA
    description: Deoxyribonucleic acid
    meaning: MI:0319
    aliases:
    - deoxyribonucleic acid
  RNA:
    text: RNA
    description: Ribonucleic acid
    meaning: MI:0320
    aliases:
    - ribonucleic acid
  PROTEIN_COMPLEX:
    text: PROTEIN_COMPLEX
    description: Multi-protein assembly
    meaning: MI:0314
    aliases:
    - complex
  GENE:
    text: GENE
    description: Gene locus
    meaning: MI:0250
  BIOPOLYMER:
    text: BIOPOLYMER
    description: Biological polymer
    meaning: MI:0383
  POLYSACCHARIDE:
    text: POLYSACCHARIDE
    description: Carbohydrate polymer
    meaning: MI:0904
  LIPID:
    text: LIPID
    description: Lipid molecule
  NUCLEIC_ACID:
    text: NUCLEIC_ACID
    description: DNA or RNA
    meaning: MI:0318
  SYNTHETIC_POLYMER:
    text: SYNTHETIC_POLYMER
    description: Artificial polymer
  METAL_ION:
    text: METAL_ION
    description: Metal ion cofactor