Enum: MarmosetChromosome
Nuclear and mitochondrial chromosomes of Callithrix jacchus (marmoset), as represented in the Monochrom Ontology (CHR). Sequence lengths and accessions are from the UCSC calJac4 assembly.
URI: valuesets:MarmosetChromosome
Permissible Values
| Value | Title | Meaning | Description | Genbank Accession | Length Bp | Refseq Accession |
|---|---|---|---|---|---|---|
| CHR1 | 1 | CHR:9483-chr1 | chromosome 1 (Marmoset) | CM018917.1 | 217961735 | NC_048383.1 |
| CHR2 | 2 | CHR:9483-chr2 | chromosome 2 (Marmoset) | CM018918.1 | 204486479 | NC_048384.1 |
| CHR3 | 3 | CHR:9483-chr3 | chromosome 3 (Marmoset) | CM018919.1 | 191910223 | NC_048385.1 |
| CHR4 | 4 | CHR:9483-chr4 | chromosome 4 (Marmoset) | CM018920.1 | 174041770 | NC_048386.1 |
| CHR5 | 5 | CHR:9483-chr5 | chromosome 5 (Marmoset) | CM018921.1 | 164351765 | NC_048387.1 |
| CHR6 | 6 | CHR:9483-chr6 | chromosome 6 (Marmoset) | CM018922.1 | 161003406 | NC_048388.1 |
| CHR7 | 7 | CHR:9483-chr7 | chromosome 7 (Marmoset) | CM018923.1 | 157546058 | NC_048389.1 |
| CHR8 | 8 | CHR:9483-chr8 | chromosome 8 (Marmoset) | CM018924.1 | 126850804 | NC_048390.1 |
| CHR9 | 9 | CHR:9483-chr9 | chromosome 9 (Marmoset) | CM018925.1 | 134044658 | NC_048391.1 |
| CHR10 | 10 | CHR:9483-chr10 | chromosome 10 (Marmoset) | CM018926.1 | 137671225 | NC_048392.1 |
| CHR11 | 11 | CHR:9483-chr11 | chromosome 11 (Marmoset) | CM018927.1 | 129688756 | NC_048393.1 |
| CHR12 | 12 | CHR:9483-chr12 | chromosome 12 (Marmoset) | CM018928.1 | 124486764 | NC_048394.1 |
| CHR13 | 13 | CHR:9483-chr13 | chromosome 13 (Marmoset) | CM018929.1 | 118934817 | NC_048395.1 |
| CHR14 | 14 | CHR:9483-chr14 | chromosome 14 (Marmoset) | CM018930.1 | 112090317 | NC_048396.1 |
| CHR15 | 15 | CHR:9483-chr15 | chromosome 15 (Marmoset) | CM018931.1 | 99198953 | NC_048397.1 |
| CHR16 | 16 | CHR:9483-chr16 | chromosome 16 (Marmoset) | CM018932.1 | 97817134 | NC_048398.1 |
| CHR17 | 17 | CHR:9483-chr17 | chromosome 17 (Marmoset) | CM018933.1 | 74942703 | NC_048399.1 |
| CHR18 | 18 | CHR:9483-chr18 | chromosome 18 (Marmoset) | CM018934.1 | 47031477 | NC_048400.1 |
| CHR19 | 19 | CHR:9483-chr19 | chromosome 19 (Marmoset) | CM018935.1 | 51570929 | NC_048401.1 |
| CHR20 | 20 | CHR:9483-chr20 | chromosome 20 (Marmoset) | CM018936.1 | 45615054 | NC_048402.1 |
| CHR21 | 21 | CHR:9483-chr21 | chromosome 21 (Marmoset) | CM018937.1 | 51259342 | NC_048403.1 |
| CHR22 | 22 | CHR:9483-chr22 | chromosome 22 (Marmoset) | CM018938.1 | 51300780 | NC_048404.1 |
| CHRX | X | CHR:9483-chrX | chromosome X (Marmoset) | CM018939.1 | 148168104 | NC_048405.1 |
| CHRY | Y | CHR:9483-chrY | chromosome Y (Marmoset) | CM023155.1 | 8228174 | NC_048406.1 |
| CHRM | M | CHR:9483-chrM | chromosome M (Marmoset) | KM588314.1 | 16499 | NC_025586.1 |
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| source_ontology | http://purl.obolibrary.org/obo/chr.owl |
| taxon | NCBITaxon:9483 |
Schema Source
- from schema: https://w3id.org/valuesets
LinkML Source
name: MarmosetChromosome
instantiates:
- valuesets_meta:ValueSetEnumDefinition
annotations:
source_ontology:
tag: source_ontology
value: http://purl.obolibrary.org/obo/chr.owl
taxon:
tag: taxon
value: NCBITaxon:9483
description: Nuclear and mitochondrial chromosomes of Callithrix jacchus (marmoset),
as represented in the Monochrom Ontology (CHR). Sequence lengths and accessions
are from the UCSC calJac4 assembly.
title: Callithrix jacchus Chromosome
from_schema: https://w3id.org/valuesets
contributors:
- orcid:0000-0002-6601-2165
- https://github.com/anthropics/claude-code
status: DRAFT
rank: 1000
permissible_values:
CHR1:
text: CHR1
description: chromosome 1 (Marmoset)
meaning: CHR:9483-chr1
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048383.1
genbank_accession:
tag: genbank_accession
value: CM018917.1
length_bp:
tag: length_bp
value: 217961735
title: '1'
aliases:
- chr1
CHR2:
text: CHR2
description: chromosome 2 (Marmoset)
meaning: CHR:9483-chr2
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048384.1
genbank_accession:
tag: genbank_accession
value: CM018918.1
length_bp:
tag: length_bp
value: 204486479
title: '2'
aliases:
- chr2
CHR3:
text: CHR3
description: chromosome 3 (Marmoset)
meaning: CHR:9483-chr3
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048385.1
genbank_accession:
tag: genbank_accession
value: CM018919.1
length_bp:
tag: length_bp
value: 191910223
title: '3'
aliases:
- chr3
CHR4:
text: CHR4
description: chromosome 4 (Marmoset)
meaning: CHR:9483-chr4
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048386.1
genbank_accession:
tag: genbank_accession
value: CM018920.1
length_bp:
tag: length_bp
value: 174041770
title: '4'
aliases:
- chr4
CHR5:
text: CHR5
description: chromosome 5 (Marmoset)
meaning: CHR:9483-chr5
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048387.1
genbank_accession:
tag: genbank_accession
value: CM018921.1
length_bp:
tag: length_bp
value: 164351765
title: '5'
aliases:
- chr5
CHR6:
text: CHR6
description: chromosome 6 (Marmoset)
meaning: CHR:9483-chr6
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048388.1
genbank_accession:
tag: genbank_accession
value: CM018922.1
length_bp:
tag: length_bp
value: 161003406
title: '6'
aliases:
- chr6
CHR7:
text: CHR7
description: chromosome 7 (Marmoset)
meaning: CHR:9483-chr7
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048389.1
genbank_accession:
tag: genbank_accession
value: CM018923.1
length_bp:
tag: length_bp
value: 157546058
title: '7'
aliases:
- chr7
CHR8:
text: CHR8
description: chromosome 8 (Marmoset)
meaning: CHR:9483-chr8
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048390.1
genbank_accession:
tag: genbank_accession
value: CM018924.1
length_bp:
tag: length_bp
value: 126850804
title: '8'
aliases:
- chr8
CHR9:
text: CHR9
description: chromosome 9 (Marmoset)
meaning: CHR:9483-chr9
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048391.1
genbank_accession:
tag: genbank_accession
value: CM018925.1
length_bp:
tag: length_bp
value: 134044658
title: '9'
aliases:
- chr9
CHR10:
text: CHR10
description: chromosome 10 (Marmoset)
meaning: CHR:9483-chr10
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048392.1
genbank_accession:
tag: genbank_accession
value: CM018926.1
length_bp:
tag: length_bp
value: 137671225
title: '10'
aliases:
- chr10
CHR11:
text: CHR11
description: chromosome 11 (Marmoset)
meaning: CHR:9483-chr11
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048393.1
genbank_accession:
tag: genbank_accession
value: CM018927.1
length_bp:
tag: length_bp
value: 129688756
title: '11'
aliases:
- chr11
CHR12:
text: CHR12
description: chromosome 12 (Marmoset)
meaning: CHR:9483-chr12
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048394.1
genbank_accession:
tag: genbank_accession
value: CM018928.1
length_bp:
tag: length_bp
value: 124486764
title: '12'
aliases:
- chr12
CHR13:
text: CHR13
description: chromosome 13 (Marmoset)
meaning: CHR:9483-chr13
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048395.1
genbank_accession:
tag: genbank_accession
value: CM018929.1
length_bp:
tag: length_bp
value: 118934817
title: '13'
aliases:
- chr13
CHR14:
text: CHR14
description: chromosome 14 (Marmoset)
meaning: CHR:9483-chr14
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048396.1
genbank_accession:
tag: genbank_accession
value: CM018930.1
length_bp:
tag: length_bp
value: 112090317
title: '14'
aliases:
- chr14
CHR15:
text: CHR15
description: chromosome 15 (Marmoset)
meaning: CHR:9483-chr15
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048397.1
genbank_accession:
tag: genbank_accession
value: CM018931.1
length_bp:
tag: length_bp
value: 99198953
title: '15'
aliases:
- chr15
CHR16:
text: CHR16
description: chromosome 16 (Marmoset)
meaning: CHR:9483-chr16
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048398.1
genbank_accession:
tag: genbank_accession
value: CM018932.1
length_bp:
tag: length_bp
value: 97817134
title: '16'
aliases:
- chr16
CHR17:
text: CHR17
description: chromosome 17 (Marmoset)
meaning: CHR:9483-chr17
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048399.1
genbank_accession:
tag: genbank_accession
value: CM018933.1
length_bp:
tag: length_bp
value: 74942703
title: '17'
aliases:
- chr17
CHR18:
text: CHR18
description: chromosome 18 (Marmoset)
meaning: CHR:9483-chr18
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048400.1
genbank_accession:
tag: genbank_accession
value: CM018934.1
length_bp:
tag: length_bp
value: 47031477
title: '18'
aliases:
- chr18
CHR19:
text: CHR19
description: chromosome 19 (Marmoset)
meaning: CHR:9483-chr19
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048401.1
genbank_accession:
tag: genbank_accession
value: CM018935.1
length_bp:
tag: length_bp
value: 51570929
title: '19'
aliases:
- chr19
CHR20:
text: CHR20
description: chromosome 20 (Marmoset)
meaning: CHR:9483-chr20
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048402.1
genbank_accession:
tag: genbank_accession
value: CM018936.1
length_bp:
tag: length_bp
value: 45615054
title: '20'
aliases:
- chr20
CHR21:
text: CHR21
description: chromosome 21 (Marmoset)
meaning: CHR:9483-chr21
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048403.1
genbank_accession:
tag: genbank_accession
value: CM018937.1
length_bp:
tag: length_bp
value: 51259342
title: '21'
aliases:
- chr21
CHR22:
text: CHR22
description: chromosome 22 (Marmoset)
meaning: CHR:9483-chr22
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048404.1
genbank_accession:
tag: genbank_accession
value: CM018938.1
length_bp:
tag: length_bp
value: 51300780
title: '22'
aliases:
- chr22
CHRX:
text: CHRX
description: chromosome X (Marmoset)
meaning: CHR:9483-chrX
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048405.1
genbank_accession:
tag: genbank_accession
value: CM018939.1
length_bp:
tag: length_bp
value: 148168104
title: X
aliases:
- chrX
CHRY:
text: CHRY
description: chromosome Y (Marmoset)
meaning: CHR:9483-chrY
annotations:
refseq_accession:
tag: refseq_accession
value: NC_048406.1
genbank_accession:
tag: genbank_accession
value: CM023155.1
length_bp:
tag: length_bp
value: 8228174
title: Y
aliases:
- chrY
CHRM:
text: CHRM
description: chromosome M (Marmoset)
meaning: CHR:9483-chrM
annotations:
refseq_accession:
tag: refseq_accession
value: NC_025586.1
genbank_accession:
tag: genbank_accession
value: KM588314.1
length_bp:
tag: length_bp
value: 16499
title: M
aliases:
- chrM
- MT
- chrMT