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Enum: MassSpectrometerFileFormat

Standard file formats used in mass spectrometry

URI: valuesets:MassSpectrometerFileFormat

Permissible Values

Value Meaning Description
MZML MS:1000584 mzML format - PSI standard for mass spectrometry data
MZXML MS:1000566 ISB mzXML format
MGF MS:1001062 Mascot Generic Format
THERMO_RAW MS:1000563 Thermo RAW format
WATERS_RAW MS:1000526 Waters raw format
WIFF MS:1000562 ABI WIFF format
MZDATA MS:1000564 PSI mzData format
PKL MS:1000565 Micromass PKL format
DTA MS:1000613 DTA format
MS2 MS:1001466 MS2 format
BRUKER_BAF MS:1000815 Bruker BAF format
BRUKER_TDF MS:1002817 Bruker TDF format
BRUKER_TSF MS:1003282 Bruker TSF format
MZ5 MS:1001881 mz5 format
MZMLB MS:1002838 mzMLb format
UIMF MS:1002531 UIMF format

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: MassSpectrometerFileFormat
description: Standard file formats used in mass spectrometry
from_schema: https://w3id.org/linkml/valuesets
rank: 1000
permissible_values:
  MZML:
    text: MZML
    description: mzML format - PSI standard for mass spectrometry data
    meaning: MS:1000584
    title: mzML format
  MZXML:
    text: MZXML
    description: ISB mzXML format
    meaning: MS:1000566
    title: ISB mzXML format
  MGF:
    text: MGF
    description: Mascot Generic Format
    meaning: MS:1001062
    title: Mascot MGF format
  THERMO_RAW:
    text: THERMO_RAW
    description: Thermo RAW format
    meaning: MS:1000563
    title: Thermo RAW format
  WATERS_RAW:
    text: WATERS_RAW
    description: Waters raw format
    meaning: MS:1000526
    title: Waters raw format
  WIFF:
    text: WIFF
    description: ABI WIFF format
    meaning: MS:1000562
    title: ABI WIFF format
  MZDATA:
    text: MZDATA
    description: PSI mzData format
    meaning: MS:1000564
    title: PSI mzData format
  PKL:
    text: PKL
    description: Micromass PKL format
    meaning: MS:1000565
    title: Micromass PKL format
  DTA:
    text: DTA
    description: DTA format
    meaning: MS:1000613
    title: DTA format
  MS2:
    text: MS2
    description: MS2 format
    meaning: MS:1001466
    title: MS2 format
  BRUKER_BAF:
    text: BRUKER_BAF
    description: Bruker BAF format
    meaning: MS:1000815
    title: Bruker BAF format
  BRUKER_TDF:
    text: BRUKER_TDF
    description: Bruker TDF format
    meaning: MS:1002817
    title: Bruker TDF format
  BRUKER_TSF:
    text: BRUKER_TSF
    description: Bruker TSF format
    meaning: MS:1003282
    title: Bruker TSF format
  MZ5:
    text: MZ5
    description: mz5 format
    meaning: MS:1001881
    title: mz5 format
  MZMLB:
    text: MZMLB
    description: mzMLb format
    meaning: MS:1002838
    title: mzMLb format
  UIMF:
    text: UIMF
    description: UIMF format
    meaning: MS:1002531
    title: UIMF format