Enum: PhenotypicSexEnum

Phenotypic sex of an individual based on observable characteristics.

FHIR mapping: AdministrativeGender

Permissible Values

Value	Title	Meaning	Description	Exact Mappings	Note
MALE		PATO:0000384	Male phenotypic sex	NCIT:C20197
FEMALE		PATO:0000383	Female phenotypic sex	NCIT:C16576
OTHER_SEX	Intersex	NCIT:C45908	Sex characteristics not clearly male or female		Includes differences of sex development (DSD)
UNKNOWN_SEX	Unknown	NCIT:C17998	Sex not assessed or not available

Slots

Name	Description
phenotypic_sex	Phenotypic sex of an individual based on observable characteristics

Identifier and Mapping Information

Annotations

property	value
stewards	https://phenopackets.org
publishers	https://ga4gh.org

Schema Source

from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: PhenotypicSexEnum
instantiates:
- valuesets_meta:ValueSetEnumDefinition
annotations:
  stewards:
    tag: stewards
    value: https://phenopackets.org
  publishers:
    tag: publishers
    value: https://ga4gh.org
description: 'Phenotypic sex of an individual based on observable characteristics.

  FHIR mapping: AdministrativeGender'
title: Phenotypic Sex
from_schema: https://w3id.org/linkml/valuesets
contributors:
- orcid:0000-0002-6601-2165
- https://github.com/anthropics/claude-code
status: STANDARD
rank: 1000
permissible_values:
  MALE:
    text: MALE
    description: Male phenotypic sex
    meaning: PATO:0000384
    exact_mappings:
    - NCIT:C20197
  FEMALE:
    text: FEMALE
    description: Female phenotypic sex
    meaning: PATO:0000383
    exact_mappings:
    - NCIT:C16576
  OTHER_SEX:
    text: OTHER_SEX
    description: Sex characteristics not clearly male or female
    meaning: NCIT:C45908
    annotations:
      note:
        tag: note
        value: Includes differences of sex development (DSD)
    title: Intersex
  UNKNOWN_SEX:
    text: UNKNOWN_SEX
    description: Sex not assessed or not available
    meaning: NCIT:C17998
    title: Unknown