Enum: ProteinModificationType

Types of protein modifications

Permissible Values

Value	Meaning	Description
METAL_COORDINATION	None	Metal coordination modification
PHOSPHORYLATION	None	Phosphorylation modification
GLYCOSYLATION	None	Glycosylation modification
ACETYLATION	None	Acetylation modification
METHYLATION	None	Methylation modification
UBIQUITINATION	None	Ubiquitination modification
SUMOYLATION	None	SUMOylation modification
HYDROXYLATION	None	Hydroxylation modification
LIPIDATION	None	Lipidation modification
PROTEOLYTIC_CLEAVAGE	None	Proteolytic cleavage
CROSSLINKING	None	Crosslinking modification

Slots

Name	Description
protein_modification	Type of protein modification

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: ProteinModificationType
description: Types of protein modifications
from_schema: https://w3id.org/linkml/valuesets
rank: 1000
permissible_values:
  METAL_COORDINATION:
    text: METAL_COORDINATION
    description: Metal coordination modification
    annotations:
      examples:
        tag: examples
        value: zinc finger, iron-sulfur cluster binding
  PHOSPHORYLATION:
    text: PHOSPHORYLATION
    description: Phosphorylation modification
  GLYCOSYLATION:
    text: GLYCOSYLATION
    description: Glycosylation modification
  ACETYLATION:
    text: ACETYLATION
    description: Acetylation modification
  METHYLATION:
    text: METHYLATION
    description: Methylation modification
  UBIQUITINATION:
    text: UBIQUITINATION
    description: Ubiquitination modification
  SUMOYLATION:
    text: SUMOYLATION
    description: SUMOylation modification
  HYDROXYLATION:
    text: HYDROXYLATION
    description: Hydroxylation modification
  LIPIDATION:
    text: LIPIDATION
    description: Lipidation modification
  PROTEOLYTIC_CLEAVAGE:
    text: PROTEOLYTIC_CLEAVAGE
    description: Proteolytic cleavage
  CROSSLINKING:
    text: CROSSLINKING
    description: Crosslinking modification