Enum: SourceMaterialTypeEnum
Types of source materials from which specimens are derived, particularly relevant for cancer and tissue banking research.
URI: valuesets:SourceMaterialTypeEnum
Permissible Values
| Value | Meaning | Description |
|---|---|---|
| PRIMARY_TUMOR | NCIT:C8509 | Primary tumor tissue |
| METASTATIC | NCIT:C3261 | Metastatic tumor tissue |
| RECURRENT_TUMOR | NCIT:C4798 | Recurrent tumor tissue |
| BLOOD_DERIVED_NORMAL | None | Normal cells derived from blood |
| BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD | None | Cancer cells from peripheral blood |
| BLOOD_DERIVED_CANCER_BONE_MARROW | None | Cancer cells from bone marrow |
| BONE_MARROW_NORMAL | None | Normal bone marrow cells |
| SOLID_TISSUE_NORMAL | None | Normal solid tissue |
| BUCCAL_CELL_NORMAL | None | Normal buccal (cheek) cells |
| NORMAL_ADJACENT_TISSUE | NCIT:C164032 | Normal tissue adjacent to tumor |
| CELL_LINES | NCIT:C16403 | Established cell lines |
| PRIMARY_XENOGRAFT_TISSUE | None | Tissue from primary xenograft |
| XENOGRAFT_TISSUE | None | Tissue derived from xenograft models |
| NEXT_GENERATION_CANCER_MODEL | None | Tissue from next-generation cancer models |
| PLEURAL_EFFUSION | NCIT:C3331 | Fluid from pleural effusion |
| SALIVA | NCIT:C13275 | Saliva specimen |
| GRANULOCYTES | NCIT:C12530 | Granulocyte cells |
| EBV_IMMORTALIZED_NORMAL | None | EBV immortalized normal cells |
| CONTROL_ANALYTE | None | Control analyte material |
| FFPE_SCROLLS | None | FFPE tissue scrolls |
| FFPE_RECURRENT | None | FFPE tissue from recurrent tumor |
| NOT_REPORTED | None | Source material type not reported |
| UNKNOWN | NCIT:C17998 | Unknown source material type |
See Also
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/linkml/valuesets
LinkML Source
name: SourceMaterialTypeEnum
instantiates:
- valuesets_meta:ValueSetEnumDefinition
description: Types of source materials from which specimens are derived, particularly
relevant for cancer and tissue banking research.
title: Source Material Types
from_schema: https://w3id.org/linkml/valuesets
see_also:
- https://github.com/RTIInternational/NHLBI-BDC-DMC-HM
contributors:
- orcid:0000-0002-6601-2165
- https://github.com/anthropics/claude-code
status: DRAFT
rank: 1000
permissible_values:
PRIMARY_TUMOR:
text: PRIMARY_TUMOR
description: Primary tumor tissue
meaning: NCIT:C8509
aliases:
- Primary Neoplasm
METASTATIC:
text: METASTATIC
description: Metastatic tumor tissue
meaning: NCIT:C3261
aliases:
- Metastatic Neoplasm
RECURRENT_TUMOR:
text: RECURRENT_TUMOR
description: Recurrent tumor tissue
meaning: NCIT:C4798
aliases:
- Recurrent Neoplasm
BLOOD_DERIVED_NORMAL:
text: BLOOD_DERIVED_NORMAL
description: Normal cells derived from blood
BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD:
text: BLOOD_DERIVED_CANCER_PERIPHERAL_BLOOD
description: Cancer cells from peripheral blood
BLOOD_DERIVED_CANCER_BONE_MARROW:
text: BLOOD_DERIVED_CANCER_BONE_MARROW
description: Cancer cells from bone marrow
BONE_MARROW_NORMAL:
text: BONE_MARROW_NORMAL
description: Normal bone marrow cells
SOLID_TISSUE_NORMAL:
text: SOLID_TISSUE_NORMAL
description: Normal solid tissue
BUCCAL_CELL_NORMAL:
text: BUCCAL_CELL_NORMAL
description: Normal buccal (cheek) cells
NORMAL_ADJACENT_TISSUE:
text: NORMAL_ADJACENT_TISSUE
description: Normal tissue adjacent to tumor
meaning: NCIT:C164032
aliases:
- Tumor-Adjacent Normal Specimen
CELL_LINES:
text: CELL_LINES
description: Established cell lines
meaning: NCIT:C16403
aliases:
- Cell Line
PRIMARY_XENOGRAFT_TISSUE:
text: PRIMARY_XENOGRAFT_TISSUE
description: Tissue from primary xenograft
XENOGRAFT_TISSUE:
text: XENOGRAFT_TISSUE
description: Tissue derived from xenograft models
NEXT_GENERATION_CANCER_MODEL:
text: NEXT_GENERATION_CANCER_MODEL
description: Tissue from next-generation cancer models
PLEURAL_EFFUSION:
text: PLEURAL_EFFUSION
description: Fluid from pleural effusion
meaning: NCIT:C3331
aliases:
- Pleural Effusion
SALIVA:
text: SALIVA
description: Saliva specimen
meaning: NCIT:C13275
aliases:
- Saliva
GRANULOCYTES:
text: GRANULOCYTES
description: Granulocyte cells
meaning: NCIT:C12530
aliases:
- Granulocyte
EBV_IMMORTALIZED_NORMAL:
text: EBV_IMMORTALIZED_NORMAL
description: EBV immortalized normal cells
CONTROL_ANALYTE:
text: CONTROL_ANALYTE
description: Control analyte material
FFPE_SCROLLS:
text: FFPE_SCROLLS
description: FFPE tissue scrolls
FFPE_RECURRENT:
text: FFPE_RECURRENT
description: FFPE tissue from recurrent tumor
NOT_REPORTED:
text: NOT_REPORTED
description: Source material type not reported
UNKNOWN:
text: UNKNOWN
description: Unknown source material type
meaning: NCIT:C17998
aliases:
- Unknown