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Enum: StrandType

The strand that a feature appears on relative to a landmark. Also encompasses unknown or irrelevant strandedness.

URI: valuesets:StrandType

Permissible Values

Value Meaning Description
NEGATIVE None Represented by "-" in a GFF file; the strand is negative wrt the landmark
POSITIVE None Represented by "+" in a GFF file; the strand is positive with relation to the...
UNKNOWN None Represented by "?" in a GFF file
UNSTRANDED None Represented by "

Slots

Name Description
strand The strand that a feature appears on relative to a landmark

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/linkml/valuesets

LinkML Source

name: StrandType
description: The strand that a feature appears on relative to a landmark. Also encompasses
  unknown or irrelevant strandedness.
from_schema: https://w3id.org/linkml/valuesets
rank: 1000
permissible_values:
  NEGATIVE:
    text: NEGATIVE
    description: Represented by "-" in a GFF file; the strand is negative wrt the
      landmark.
    title: negative
  POSITIVE:
    text: POSITIVE
    description: Represented by "+" in a GFF file; the strand is positive with relation
      to the landmark.
    title: positive
  UNKNOWN:
    text: UNKNOWN
    description: Represented by "?" in a GFF file. The strandedness is relevant but
      unknown.
    title: unknown
  UNSTRANDED:
    text: UNSTRANDED
    description: Represented by "." in a GFF file; the feature is not stranded.
    title: unstranded