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Subset: BasicSubset

An extension of MinimalSubset that avoids advanced constructs and can be implemented by a broad variety of tools.

__

This subset roughly corresponds to the union of most standard constructs used in relational datamodel modeling,

object oriented modeling, and simple JSON-style modeling, while avoiding more advanced constructs from these languages.

__

It is often possible to translate from a more expressive schema to a BasicSubset schema, through a schema derivation

process

URI: [BasicSubset](BasicSubset.md) ## Identifier and Mapping Information ### Administrative Metadata **Rank:** 1 ### Schema Source * from schema: https://w3id.org/linkml/meta ## Classes in subset | Class | Description | | --- | --- | | [SchemaDefinition](SchemaDefinition.md) | A collection of definitions that make up a schema or a data model | | [ClassDefinition](ClassDefinition.md) | an element whose instances are complex objects that may have slot-value assig... | | [SlotDefinition](SlotDefinition.md) | an element that describes how instances are related to other instances | | [TypeDefinition](TypeDefinition.md) | an element that whose instances are atomic scalar values that can be mapped t... | | [EnumDefinition](EnumDefinition.md) | an element whose instances must be drawn from a specified set of permissible ... | | [SubsetDefinition](SubsetDefinition.md) | an element that can be used to group other metamodel elements | | [Prefix](Prefix.md) | prefix URI tuple | | [PermissibleValue](PermissibleValue.md) | a permissible value, accompanied by intended text and an optional mapping to ... | | [UniqueKey](UniqueKey.md) | a collection of slots whose values uniquely identify an instance of a class | | [CommonMetadata](CommonMetadata.md) | Generic metadata shared across definitions | | [Element](Element.md) | A named element in the model | | [Definition](Definition.md) | abstract base class for core metaclasses | | [Example](Example.md) | usage example and description | | [AltDescription](AltDescription.md) | an attributed description | ### Slots from [SchemaDefinition](SchemaDefinition.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [id](id.md) | 1
[Uri](Uri.md) | The official schema URI | | [name](name.md) | 1
[Ncname](Ncname.md) | a unique name for the schema that is both human-readable and consists of only... **identifier** | | [classes](classes.md) | *
[ClassDefinition](ClassDefinition.md) | An index to the collection of all class definitions in the schema | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [slot_definitions](slot_definitions.md) | *
[SlotDefinition](SlotDefinition.md) | An index to the collection of all slot definitions in the schema | | [enums](enums.md) | *
[EnumDefinition](EnumDefinition.md) | An index to the collection of all enum definitions in the schema | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [types](types.md) | *
[TypeDefinition](TypeDefinition.md) | An index to the collection of all type definitions in the schema | | [subsets](subsets.md) | *
[SubsetDefinition](SubsetDefinition.md) | An index to the collection of all subset definitions in the schema | | [prefixes](prefixes.md) | *
[Prefix](Prefix.md) | A collection of prefix expansions that specify how CURIEs can be expanded to ... | | [default_prefix](default_prefix.md) | 0..1
[String](String.md) | The prefix that is used for all elements within a schema | | [default_range](default_range.md) | 0..1
[TypeDefinition](TypeDefinition.md) | default slot range to be used if range element is omitted from a slot definit... | | [imports](imports.md) | *
[Uriorcurie](Uriorcurie.md) | A list of schemas that are to be included in this schema | | [license](license.md) | 0..1
[String](String.md) | license for the schema | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [version](version.md) | 0..1
[String](String.md) | particular version of schema | | [default_curi_maps](default_curi_maps.md) | *
[String](String.md) | ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes... | | [metamodel_version](metamodel_version.md) | 0..1
[String](String.md) | Version of the metamodel used to load the schema | | [source_file](source_file.md) | 0..1
[String](String.md) | name, uri or description of the source of the schema | | [source_file_date](source_file_date.md) | 0..1
[Datetime](Datetime.md) | modification date of the source of the schema | | [source_file_size](source_file_size.md) | 0..1
[Integer](Integer.md) | size in bytes of the source of the schema | | [generation_date](generation_date.md) | 0..1
[Datetime](Datetime.md) | date and time that the schema was loaded/generated | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [ClassDefinition](ClassDefinition.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [name](name.md) | 1
[String](String.md) | the unique name of the element within the context of the schema **identifier** | | [class_uri](class_uri.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URI of the class that provides a semantic interpretation of the element in a ... | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [is_a](is_a.md) | 0..1
[ClassDefinition](ClassDefinition.md) | A primary parent class from which inheritable metaslots are propagated | | [mixins](mixins.md) | *
[ClassDefinition](ClassDefinition.md) | A collection of secondary parent mixin classes from which inheritable metaslo... | | [slots](slots.md) | *
[SlotDefinition](SlotDefinition.md) | collection of slot names that are applicable to a class | | [slot_usage](slot_usage.md) | *
[SlotDefinition](SlotDefinition.md) | the refinement of a slot in the context of the containing class definition | | [attributes](attributes.md) | *
[SlotDefinition](SlotDefinition.md) | Inline definition of slots | | [tree_root](tree_root.md) | 0..1
[Boolean](Boolean.md) | Indicates that this is the Container class which forms the root of the serial... | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [unique_keys](unique_keys.md) | *
[UniqueKey](UniqueKey.md) | A collection of named unique keys for this class | | [extra_slots](extra_slots.md) | 0..1
[ExtraSlotsExpression](ExtraSlotsExpression.md) | How a class instance handles extra data not specified in the class definition | | [abstract](abstract.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot cannot be directly instantiated and is intended f... | | [mixin](mixin.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot is intended to be inherited from without being an... | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [SlotDefinition](SlotDefinition.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [name](name.md) | 1
[String](String.md) | the unique name of the element within the context of the schema **identifier** | | [slot_uri](slot_uri.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URI of the class that provides a semantic interpretation of the slot in a lin... | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [identifier](identifier.md) | 0..1
[Boolean](Boolean.md) | True means that the key slot(s) uniquely identifies the elements | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [multivalued](multivalued.md) | 0..1
[Boolean](Boolean.md) | true means that slot can have more than one value and should be represented u... | | [required](required.md) | 0..1
[Boolean](Boolean.md) | true means that the slot must be present in instances of the class definition | | [recommended](recommended.md) | 0..1
[Boolean](Boolean.md) | true means that the slot should be present in instances of the class definiti... | | [is_a](is_a.md) | 0..1
[SlotDefinition](SlotDefinition.md) | A primary parent slot from which inheritable metaslots are propagated | | [mixins](mixins.md) | *
[SlotDefinition](SlotDefinition.md) | A collection of secondary parent mixin slots from which inheritable metaslots... | | [inlined](inlined.md) | 0..1
[Boolean](Boolean.md) | True means that keyed or identified slot appears in an outer structure by val... | | [inlined_as_list](inlined_as_list.md) | 0..1
[Boolean](Boolean.md) | True means that an inlined slot is represented as a list of range instances | | [pattern](pattern.md) | 0..1
[String](String.md) | the string value of the slot must conform to this regular expression expresse... | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [singular_name](singular_name.md) | 0..1
[String](String.md) | a name that is used in the singular form | | [key](key.md) | 0..1
[Boolean](Boolean.md) | True means that the key slot(s) uniquely identify the elements within a singl... | | [slot_group](slot_group.md) | 0..1
[SlotDefinition](SlotDefinition.md) | allows for grouping of related slots into a grouping slot that serves the rol... | | [is_grouping_slot](is_grouping_slot.md) | 0..1
[Boolean](Boolean.md) | true if this slot is a grouping slot | | [range](range.md) | 0..1
[Element](Element.md) | defines the type of the object of the slot | | [minimum_value](minimum_value.md) | 0..1
[Anything](Anything.md) | For ordinal ranges, the value must be equal to or higher than this | | [maximum_value](maximum_value.md) | 0..1
[Anything](Anything.md) | For ordinal ranges, the value must be equal to or lower than this | | [abstract](abstract.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot cannot be directly instantiated and is intended f... | | [mixin](mixin.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot is intended to be inherited from without being an... | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [TypeDefinition](TypeDefinition.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [name](name.md) | 1
[String](String.md) | the unique name of the element within the context of the schema **identifier** | | [type_uri](type_uri.md) | 0..1
[Uriorcurie](Uriorcurie.md) | The uri that defines the possible values for the type definition | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [typeof](typeof.md) | 0..1
[TypeDefinition](TypeDefinition.md) | A parent type from which type properties are inherited | | [base](base.md) | 0..1
[String](String.md) | python base type in the LinkML runtime that implements this type definition | | [repr](repr.md) | 0..1
[String](String.md) | the name of the python object that implements this type definition | | [pattern](pattern.md) | 0..1
[String](String.md) | the string value of the slot must conform to this regular expression expresse... | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [minimum_value](minimum_value.md) | 0..1
[Anything](Anything.md) | For ordinal ranges, the value must be equal to or higher than this | | [maximum_value](maximum_value.md) | 0..1
[Anything](Anything.md) | For ordinal ranges, the value must be equal to or lower than this | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [EnumDefinition](EnumDefinition.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [name](name.md) | 1
[String](String.md) | the unique name of the element within the context of the schema **identifier** | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [is_a](is_a.md) | 0..1
[Definition](Definition.md) | A primary parent class or slot from which inheritable metaslots are propagate... | | [mixins](mixins.md) | *
[Definition](Definition.md) | A collection of secondary parent classes or slots from which inheritable meta... | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [enum_uri](enum_uri.md) | 0..1
[Uriorcurie](Uriorcurie.md) | URI of the enum that provides a semantic interpretation of the element in a l... | | [code_set](code_set.md) | 0..1
[Uriorcurie](Uriorcurie.md) | the identifier of an enumeration code set | | [code_set_tag](code_set_tag.md) | 0..1
[String](String.md) | the version tag of the enumeration code set | | [code_set_version](code_set_version.md) | 0..1
[String](String.md) | the version identifier of the enumeration code set | | [pv_formula](pv_formula.md) | 0..1
[PvFormulaOptions](PvFormulaOptions.md) | Defines the specific formula to be used to generate the permissible values | | [permissible_values](permissible_values.md) | *
[PermissibleValue](PermissibleValue.md) | A list of possible values for a slot range | | [abstract](abstract.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot cannot be directly instantiated and is intended f... | | [mixin](mixin.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot is intended to be inherited from without being an... | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [SubsetDefinition](SubsetDefinition.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [name](name.md) | 1
[String](String.md) | the unique name of the element within the context of the schema **identifier** | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [Prefix](Prefix.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [prefix_prefix](prefix_prefix.md) | 1
[Ncname](Ncname.md) | The prefix components of a prefix expansions | | [prefix_reference](prefix_reference.md) | 1
[Uri](Uri.md) | The namespace to which a prefix expands to | ### Slots from [PermissibleValue](PermissibleValue.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [is_a](is_a.md) | 0..1
[PermissibleValue](PermissibleValue.md) | A primary parent class or slot from which inheritable metaslots are propagate... | | [mixins](mixins.md) | *
[PermissibleValue](PermissibleValue.md) | A collection of secondary parent classes or slots from which inheritable meta... | | [text](text.md) | 1
[String](String.md) | The actual permissible value itself **identifier** | | [meaning](meaning.md) | 0..1
[Uriorcurie](Uriorcurie.md) | the value meaning of a permissible value | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [UniqueKey](UniqueKey.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [unique_key_name](unique_key_name.md) | 1
[String](String.md) | name of the unique key | | [unique_key_slots](unique_key_slots.md) | 1..*
[SlotDefinition](SlotDefinition.md) | list of slot names that form a key | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [CommonMetadata](CommonMetadata.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [Element](Element.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [name](name.md) | 1
[String](String.md) | the unique name of the element within the context of the schema **identifier** | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [Definition](Definition.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [name](name.md) | 1
[String](String.md) | the unique name of the element within the context of the schema **identifier** | | [title](title.md) | 0..1
[String](String.md) | A concise human-readable display label for the element | | [description](description.md) | 0..1 _recommended_
[String](String.md) | a textual description of the element's purpose and use | | [is_a](is_a.md) | 0..1
[Definition](Definition.md) | A primary parent class or slot from which inheritable metaslots are propagate... | | [mixins](mixins.md) | *
[Definition](Definition.md) | A collection of secondary parent classes or slots from which inheritable meta... | | [rank](rank.md) | 0..1
[Integer](Integer.md) | the relative order in which the element occurs, lower values are given preced... | | [abstract](abstract.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot cannot be directly instantiated and is intended f... | | [mixin](mixin.md) | 0..1
[Boolean](Boolean.md) | Indicates the class or slot is intended to be inherited from without being an... | | [id_prefixes](id_prefixes.md) | *
[Ncname](Ncname.md) | An allowed list of prefixes for which identifiers must conform | | [conforms_to](conforms_to.md) | 0..1
[String](String.md) | An established standard to which the element conforms | | [alt_descriptions](alt_descriptions.md) | *
[AltDescription](AltDescription.md) | A sourced alternative description for an element | | [deprecated](deprecated.md) | 0..1
[String](String.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | *
[String](String.md) | Outstanding issues that needs resolution | | [notes](notes.md) | *
[String](String.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | *
[String](String.md) | notes and comments about an element intended primarily for external consumpti... | | [examples](examples.md) | *
[Example](Example.md) | example usages of an element | | [in_subset](in_subset.md) | *
[SubsetDefinition](SubsetDefinition.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [source](source.md) | 0..1
[Uriorcurie](Uriorcurie.md) | A related resource from which the element is derived | | [see_also](see_also.md) | *
[Uriorcurie](Uriorcurie.md) | A list of related entities or URLs that may be of relevance | | [aliases](aliases.md) | *
[String](String.md) | Alternate names/labels for the element | | [created_by](created_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that created the element | | [contributors](contributors.md) | *
[Uriorcurie](Uriorcurie.md) | agent that contributed to the element | | [created_on](created_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | 0..1
[Datetime](Datetime.md) | time at which the element was last updated | | [modified_by](modified_by.md) | 0..1
[Uriorcurie](Uriorcurie.md) | agent that modified the element | | [status](status.md) | 0..1
[Uriorcurie](Uriorcurie.md) | status of the element | | [categories](categories.md) | *
[Uriorcurie](Uriorcurie.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | *
[String](String.md) | Keywords or tags used to describe the element | ### Slots from [Example](Example.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [value](value.md) | 0..1
[String](String.md) | example value | | [value_description](value_description.md) | 0..1
[String](String.md) | description of what the value is doing | | [value_object](value_object.md) | 0..1
[Anything](Anything.md) | direct object representation of the example | ### Slots from [AltDescription](AltDescription.md) also in _BasicSubset_ | Name | Cardinality and Range | Description | | --- | --- | --- | | [alt_description_source](alt_description_source.md) | 1
[String](String.md) | the source of an attributed description | | [alt_description_text](alt_description_text.md) | 1
[String](String.md) | text of an attributed description | ## Slots in subset | Slot | Description | | --- | --- | | [id](id.md) | The official schema URI | | [name](name.md) | the unique name of the element within the context of the schema | | [prefix_prefix](prefix_prefix.md) | The prefix components of a prefix expansions | | [class_uri](class_uri.md) | URI of the class that provides a semantic interpretation of the element in a ... | | [slot_uri](slot_uri.md) | URI of the class that provides a semantic interpretation of the slot in a lin... | | [type_uri](type_uri.md) | The uri that defines the possible values for the type definition | | [prefix_reference](prefix_reference.md) | The namespace to which a prefix expands to | | [title](title.md) | A concise human-readable display label for the element | | [classes](classes.md) | An index to the collection of all class definitions in the schema | | [slot_definitions](slot_definitions.md) | An index to the collection of all slot definitions in the schema | | [description](description.md) | a textual description of the element's purpose and use | | [enums](enums.md) | An index to the collection of all enum definitions in the schema | | [identifier](identifier.md) | True means that the key slot(s) uniquely identifies the elements | | [types](types.md) | An index to the collection of all type definitions in the schema | | [multivalued](multivalued.md) | true means that slot can have more than one value and should be represented u... | | [typeof](typeof.md) | A parent type from which type properties are inherited | | [subsets](subsets.md) | An index to the collection of all subset definitions in the schema | | [required](required.md) | true means that the slot must be present in instances of the class definition | | [base](base.md) | python base type in the LinkML runtime that implements this type definition | | [recommended](recommended.md) | true means that the slot should be present in instances of the class definiti... | | [repr](repr.md) | the name of the python object that implements this type definition | | [prefixes](prefixes.md) | A collection of prefix expansions that specify how CURIEs can be expanded to ... | | [is_a](is_a.md) | A primary parent class or slot from which inheritable metaslots are propagate... | | [default_prefix](default_prefix.md) | The prefix that is used for all elements within a schema | | [mixins](mixins.md) | A collection of secondary parent classes or slots from which inheritable meta... | | [default_range](default_range.md) | default slot range to be used if range element is omitted from a slot definit... | | [slots](slots.md) | collection of slot names that are applicable to a class | | [text](text.md) | The actual permissible value itself | | [imports](imports.md) | A list of schemas that are to be included in this schema | | [meaning](meaning.md) | the value meaning of a permissible value | | [slot_usage](slot_usage.md) | the refinement of a slot in the context of the containing class definition | | [inlined](inlined.md) | True means that keyed or identified slot appears in an outer structure by val... | | [inlined_as_list](inlined_as_list.md) | True means that an inlined slot is represented as a list of range instances | | [attributes](attributes.md) | Inline definition of slots | | [license](license.md) | license for the schema | | [tree_root](tree_root.md) | Indicates that this is the Container class which forms the root of the serial... | | [pattern](pattern.md) | the string value of the slot must conform to this regular expression expresse... | | [rank](rank.md) | the relative order in which the element occurs, lower values are given preced... | | [conforms_to](conforms_to.md) | An established standard to which the element conforms | | [categories](categories.md) | Controlled terms used to categorize an element | | [keywords](keywords.md) | Keywords or tags used to describe the element | | [id_prefixes](id_prefixes.md) | An allowed list of prefixes for which identifiers must conform | | [aliases](aliases.md) | Alternate names/labels for the element | | [deprecated](deprecated.md) | Description of why and when this element will no longer be used | | [todos](todos.md) | Outstanding issues that needs resolution | | [notes](notes.md) | editorial notes about an element intended primarily for internal consumption | | [comments](comments.md) | notes and comments about an element intended primarily for external consumpti... | | [in_subset](in_subset.md) | used to indicate membership of a term in a defined subset of terms used for a... | | [see_also](see_also.md) | A list of related entities or URLs that may be of relevance | | [owned_by](owned_by.md) | agent that owns or is the steward of the element | | [created_by](created_by.md) | agent that created the element | | [contributors](contributors.md) | agent that contributed to the element | | [created_on](created_on.md) | time at which the element was created | | [last_updated_on](last_updated_on.md) | time at which the element was last updated | | [modified_by](modified_by.md) | agent that modified the element | | [status](status.md) | status of the element | | [source](source.md) | A related resource from which the element is derived | | [publisher](publisher.md) | An entity responsible for making the resource available | | [abstract](abstract.md) | Indicates the class or slot cannot be directly instantiated and is intended f... | | [mixin](mixin.md) | Indicates the class or slot is intended to be inherited from without being an... | | [code_set](code_set.md) | the identifier of an enumeration code set | | [code_set_version](code_set_version.md) | the version identifier of the enumeration code set | | [code_set_tag](code_set_tag.md) | the version tag of the enumeration code set | | [pv_formula](pv_formula.md) | Defines the specific formula to be used to generate the permissible values | | [permissible_values](permissible_values.md) | A list of possible values for a slot range | | [enum_uri](enum_uri.md) | URI of the enum that provides a semantic interpretation of the element in a l... | | [version](version.md) | particular version of schema | | [default_curi_maps](default_curi_maps.md) | ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes... | | [metamodel_version](metamodel_version.md) | Version of the metamodel used to load the schema | | [source_file](source_file.md) | name, uri or description of the source of the schema | | [source_file_date](source_file_date.md) | modification date of the source of the schema | | [source_file_size](source_file_size.md) | size in bytes of the source of the schema | | [generation_date](generation_date.md) | date and time that the schema was loaded/generated | | [unique_keys](unique_keys.md) | A collection of named unique keys for this class | | [unique_key_name](unique_key_name.md) | name of the unique key | | [unique_key_slots](unique_key_slots.md) | list of slot names that form a key | | [extra_slots](extra_slots.md) | How a class instance handles extra data not specified in the class definition | | [allowed](allowed.md) | Whether or not something is allowed | | [range](range.md) | defines the type of the object of the slot | | [singular_name](singular_name.md) | a name that is used in the singular form | | [key](key.md) | True means that the key slot(s) uniquely identify the elements within a singl... | | [minimum_value](minimum_value.md) | For ordinal ranges, the value must be equal to or higher than this | | [maximum_value](maximum_value.md) | For ordinal ranges, the value must be equal to or lower than this | | [alt_description_text](alt_description_text.md) | text of an attributed description | | [alt_description_source](alt_description_source.md) | the source of an attributed description | | [alt_descriptions](alt_descriptions.md) | A sourced alternative description for an element | | [value](value.md) | example value | | [value_description](value_description.md) | description of what the value is doing | | [value_object](value_object.md) | direct object representation of the example | | [examples](examples.md) | example usages of an element | | [slot_group](slot_group.md) | allows for grouping of related slots into a grouping slot that serves the rol... | | [is_grouping_slot](is_grouping_slot.md) | true if this slot is a grouping slot | ## Enumerations in subset | Enumeration | Description | | --- | --- | | [PvFormulaOptions](PvFormulaOptions.md) | The formula used to generate the set of permissible values from the code_set ... |