Tutorials

Tutorials for using LinkML store.

Two tutorials are provided, one for using the command line interface and one for using the Python API. Start with whichever is most appropriate for your use case.

Contents:

• Tutorial: Using the Command Line Interface
  • Top level command
  • Inserting objects from a file
  • Querying
  • Describing the data set
  • Facet Counts
  • Search
    • Indexing a collection
    • Searching a collection using an index
  • Indexing using an LLM (OPTIONAL)
  • Schemas
  • Configuration Files and Explicit Schemas
  • Validation
    • Run validation
• Tutorial: Using the Python API
  • Create a Client object
  • Attach and populate a DuckDB in-memory database
  • Querying
  • Faceting
  • Plotting
  • Complex objects
  • Schemas
  • Asserting schemas
  • Other adapters
  • Indexing