Code

• MetaModel
  • Definitions
    • SchemaDefinition
    • ClassDefinition
    • SlotDefinition
    • TypeDefinition
    • EnumDefinition
  • Arrays
    • ArrayExpression
    • DimensionExpression
• Utils
  • linkml.utils.datautils module
    • get_dumper()
    • get_loader()
    • infer_index_slot()
    • infer_root_class()
  • linkml.utils.datavalidator module
    • DataValidator
      • DataValidator.schema
      • DataValidator.validate_dict()
  • linkml.utils.execute_tutorial module
    • Block
      • Block.annotations
      • Block.category
      • Block.content
      • Block.error
      • Block.expected_fail
      • Block.is_bash()
      • Block.is_file_block()
      • Block.is_stdout()
      • Block.output
      • Block.prior_lines
      • Block.title
    • execute_blocks()
    • parse_file_to_blocks()
    • write_lines()
  • linkml.utils.generator module
    • Developer Notes
    • Generator
      • Generator.add_id_prefixes()
      • Generator.add_mappings()
      • Generator.add_prefix()
      • Generator.aliased_slot_name()
      • Generator.all_slots()
      • Generator.ancestors()
      • Generator.base_dir
      • Generator.class_identifier()
      • Generator.class_identifier_path()
      • Generator.class_or_type_for()
      • Generator.class_or_type_name()
      • Generator.default_prefix()
      • Generator.directory_output
      • Generator.domain_slots()
      • Generator.emit_prefixes
      • Generator.end_class()
      • Generator.end_schema()
      • Generator.enum_identifier_path()
      • Generator.file_extension
      • Generator.format
      • Generator.formatted_element_name()
      • Generator.generatorname
      • Generator.generatorversion
      • Generator.get_metamodel_slot_name()
      • Generator.importmap
      • Generator.include
      • Generator.is_class_unconstrained()
      • Generator.log_level
      • Generator.logger
      • Generator.mergeimports
      • Generator.metadata
      • Generator.metamodel
      • Generator.metamodel_name_map
      • Generator.namespaces
      • Generator.neighborhood()
      • Generator.obj_for()
      • Generator.output
      • Generator.own_slot_names()
      • Generator.own_slots()
      • Generator.parent()
      • Generator.range_type_path()
      • Generator.requires_metamodel
      • Generator.schema
      • Generator.schemaview
      • Generator.serialize()
      • Generator.slot_for()
      • Generator.slot_name()
      • Generator.slot_range_path()
      • Generator.sort_class_slots
      • Generator.source_file_date
      • Generator.source_file_size
      • Generator.stacktrace
      • Generator.subset_for()
      • Generator.subset_name()
      • Generator.uses_schemaloader
      • Generator.useuris
      • Generator.valid_formats
      • Generator.verbose
      • Generator.visit_all_class_slots
      • Generator.visit_class()
      • Generator.visit_class_slot()
      • Generator.visit_enum()
      • Generator.visit_schema()
      • Generator.visit_slot()
      • Generator.visit_subset()
      • Generator.visit_type()
      • Generator.visits_are_sorted
    • shared_arguments()
  • linkml.utils.helpers module
    • convert_to_snake_case()
    • get_range_associated_slots()
    • is_simple_dict()
    • remove_duplicates()
    • write_to_file()
  • linkml.utils.mergeutils module
    • alias_root()
    • merge_classes()
    • merge_dicts()
    • merge_enums()
    • merge_namespaces()
    • merge_schemas()
    • merge_slots()
    • resolve_merged_imports()
    • set_from_schema()
    • slot_usage_name()
  • linkml.utils.rawloader module
    • load_raw_schema()
    • mrf()
  • linkml.utils.schemaloader module
    • SchemaLoader
      • SchemaLoader.check_prefix()
      • SchemaLoader.check_prefixes()
      • SchemaLoader.logger_warning()
      • SchemaLoader.merge_class()
      • SchemaLoader.merge_enum()
      • SchemaLoader.merge_slot()
      • SchemaLoader.merge_type()
      • SchemaLoader.process_slot_usage_definitions()
      • SchemaLoader.process_slot_usages()
      • SchemaLoader.raise_value_error()
      • SchemaLoader.raise_value_errors()
      • SchemaLoader.resolve()
      • SchemaLoader.schema_errors()
      • SchemaLoader.slot_definition_for()
      • SchemaLoader.slot_name_for()
      • SchemaLoader.validate_item_names()
  • linkml.utils.schemasynopsis module
    • SchemaSynopsis
      • SchemaSynopsis.abstracts
      • SchemaSynopsis.add_ref()
      • SchemaSynopsis.applytorefs
      • SchemaSynopsis.applytos
      • SchemaSynopsis.classrefs
      • SchemaSynopsis.codesets
      • SchemaSynopsis.definingslots
      • SchemaSynopsis.enumrefs
      • SchemaSynopsis.errors()
      • SchemaSynopsis.inschema
      • SchemaSynopsis.inverses
      • SchemaSynopsis.isarefs
      • SchemaSynopsis.mixinrefs
      • SchemaSynopsis.mixins
      • SchemaSynopsis.owners
      • SchemaSynopsis.ownslots
      • SchemaSynopsis.rangerefs
      • SchemaSynopsis.roots
      • SchemaSynopsis.schema
      • SchemaSynopsis.slotclasses
      • SchemaSynopsis.slotrefs
      • SchemaSynopsis.slotusages
      • SchemaSynopsis.subsetrefs
      • SchemaSynopsis.summarize_class_definition()
      • SchemaSynopsis.summarize_definition()
      • SchemaSynopsis.summarize_element()
      • SchemaSynopsis.summarize_enum_definition()
      • SchemaSynopsis.summarize_slot_definition()
      • SchemaSynopsis.summarize_type_definition()
      • SchemaSynopsis.summary()
      • SchemaSynopsis.typebases
      • SchemaSynopsis.typeofs
      • SchemaSynopsis.typerefs
    • empty_references()
  • linkml.utils.typereferences module
    • RefType
      • RefType.name
    • References
      • References.addref()
      • References.classrefs
      • References.enumrefs
      • References.slotrefs
      • References.subsetrefs
      • References.typerefs
      • References.update()
  • linkml.utils.validation module
    • validate_object()
  • Module contents
    • deprecation_warning()
• Validator
  • Validator
    • Validator.iter_results()
    • Validator.iter_results_from_source()
    • Validator.validate()
    • Validator.validate_source()
  • validate()
  • validate_file()
  • Loaders
    • CsvLoader
    • JsonLoader
    • Loader
    • TsvLoader
    • YamlLoader
  • Plugins
    • JsonschemaValidationPlugin
    • PydanticValidationPlugin
    • RecommendedSlotsPlugin
    • ValidationPlugin
  • CLI
    • linkml-validate
• Deprecation Log
  • pydanticgen-v1
  • pydantic-v1
  • validators
  • gen-yuml
  • gen-markdown