linkml
Contents:
LinkML at a glance
Quick Install Guide
Tutorial
LinkML Schemas
Working with Data
Generators
Examples of use
The LinkML Ecosystem
LinkML specification
Contribution Guidelines
FAQ
Developers guide:
Developers guide
Code
linkml
»
Index
Index
Symbols
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A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
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X
|
Y
Symbols
--add-ols-annotations
gen-owl command line option
--base
gen-jsonld-context command line option
gen-prefix-map command line option
--classes
gen-markdown command line option
--classvars
gen-python command line option
--closed
gen-json-schema command line option
--config-file
gen-project command line option
--declarative
gen-sqlddl command line option
--dialect
gen-sqlddl command line option
--dir
gen-markdown command line option
gen-project command line option
gen-sparql command line option
--direct-mapping
gen-sqlddl command line option
--exclude
gen-project command line option
--flatprefixes
gen-jsonld-context command line option
--format
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--generate-classes
gen-sqlddl command line option
--generate-records
gen-java command line option
--generator-arguments
gen-project command line option
--genmeta
gen-python command line option
--head
gen-python command line option
--img
gen-markdown command line option
--importmap
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--include
gen-project command line option
--include-range-class-descendants
gen-json-schema command line option
--index-file
gen-markdown command line option
--inline
gen-json-schema command line option
--log_level
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--map-fields
gen-markdown command line option
--mergeimports
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-project command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--metaclasses
gen-owl command line option
--metadata
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--metadata-profile
gen-owl command line option
--metauris
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--model
gen-jsonld-context command line option
--no-add-ols-annotations
gen-owl command line option
--no-classvars
gen-python command line option
--no-declarative
gen-sqlddl command line option
--no-direct-mapping
gen-sqlddl command line option
--no-flatprefixes
gen-jsonld-context command line option
--no-generate-classes
gen-sqlddl command line option
--no-generate-records
gen-java command line option
--no-genmeta
gen-python command line option
--no-head
gen-python command line option
--no-mergeimports
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-project command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--no-metaclasses
gen-owl command line option
--no-metadata
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--no-model
gen-jsonld-context command line option
--no-prefixes
gen-jsonld-context command line option
--no-pydantic
gen-sqlddl command line option
--no-range-class-descendants
gen-json-schema command line option
--no-slots
gen-python command line option
--no-type-objects
gen-owl command line option
--no-use-foreign-keys
gen-sqlddl command line option
,
[1]
--noimages
gen-markdown command line option
--not-closed
gen-json-schema command line option
--notypesdir
gen-markdown command line option
--noyuml
gen-markdown command line option
--ontology-iri-suffix
gen-owl command line option
--output
gen-excel command line option
gen-owl command line option
gen-prefix-map command line option
gen-shex command line option
gen-sssom command line option
--output-directory
gen-java command line option
--package
gen-java command line option
--prefixes
gen-jsonld-context command line option
--pydantic
gen-sqlddl command line option
--python-import
gen-sqlddl command line option
--slots
gen-python command line option
--sqla-file
gen-sqlddl command line option
--template-file
gen-java command line option
--template_file
gen-pydantic command line option
--top-class
gen-json-schema command line option
--type-objects
gen-owl command line option
--use-foreign-keys
gen-sqlddl command line option
,
[1]
--useuris
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--verbose
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
--warnonexist
gen-markdown command line option
-A
gen-project command line option
-C
gen-project command line option
-c
gen-markdown command line option
-d
gen-markdown command line option
gen-project command line option
gen-sparql command line option
-f
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
-I
gen-markdown command line option
gen-project command line option
-i
gen-json-schema command line option
gen-markdown command line option
-im
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
-M
gen-markdown command line option
-o
gen-excel command line option
gen-owl command line option
gen-prefix-map command line option
gen-shex command line option
gen-sssom command line option
-t
gen-json-schema command line option
-v
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
-X
gen-project command line option
A
abstract (linkml.generators.oocodegen.OOClass attribute)
abstracts (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
add_class() (linkml_runtime.utils.schemaview.SchemaView method)
add_column() (linkml.generators.sqlddlgen.SQLTable method)
add_enum() (linkml_runtime.utils.schemaview.SchemaView method)
add_id_prefixes() (linkml.utils.generator.Generator method)
add_mappings() (linkml.utils.generator.Generator method)
add_metadata() (linkml.generators.owlgen.OwlSchemaGenerator method)
add_prefix() (linkml.utils.generator.Generator method)
add_ref() (linkml.utils.schemasynopsis.SchemaSynopsis method)
add_slot() (linkml_runtime.utils.schemaview.SchemaView method)
add_subset() (linkml_runtime.utils.schemaview.SchemaView method)
add_table() (linkml.generators.sqlddlgen.SQLSchema method)
add_type() (linkml_runtime.utils.schemaview.SchemaView method)
addref() (linkml.utils.typereferences.References method)
adjust_slot() (linkml.generators.jsonldgen.JSONLDGenerator method)
alias_root() (in module linkml.utils.mergeutils)
aliased_slot_name() (linkml.utils.generator.Generator method)
all_class() (linkml_runtime.utils.schemaview.SchemaView method)
all_classes() (linkml_runtime.utils.schemaview.SchemaView method)
all_columns() (linkml.generators.sqlddlgen.SQLSchema method)
all_element() (linkml_runtime.utils.schemaview.SchemaView method)
all_elements() (linkml_runtime.utils.schemaview.SchemaView method)
all_enum() (linkml_runtime.utils.schemaview.SchemaView method)
all_enums() (linkml_runtime.utils.schemaview.SchemaView method)
all_fields (linkml.generators.oocodegen.OOClass attribute)
all_schema() (linkml_runtime.utils.schemaview.SchemaView method)
all_slot() (linkml_runtime.utils.schemaview.SchemaView method)
all_slots() (linkml.utils.generator.Generator method)
(linkml_runtime.utils.schemaview.SchemaView method)
all_subset() (linkml_runtime.utils.schemaview.SchemaView method)
all_subsets() (linkml_runtime.utils.schemaview.SchemaView method)
all_type() (linkml_runtime.utils.schemaview.SchemaView method)
all_types() (linkml_runtime.utils.schemaview.SchemaView method)
ancestors() (linkml.utils.generator.Generator method)
anchor() (linkml.generators.markdowngen.MarkdownGenerator static method)
anchorend() (linkml.generators.markdowngen.MarkdownGenerator static method)
annotation_dict() (linkml_runtime.utils.schemaview.SchemaView method)
annotations (linkml.generators.oocodegen.OOClass attribute)
(linkml.generators.oocodegen.OOField attribute)
(linkml.utils.execute_tutorial.Block attribute)
applytorefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
applytos (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
as_ddlstr() (linkml.generators.sqlddlgen.SQLColumn method)
as_graph() (linkml.generators.shaclgen.ShaclGenerator method)
as_var() (linkml.generators.sqlddlgen.SQLTable method)
B
Backref (class in linkml.generators.sqlddlgen)
backref_column (linkml.generators.sqlddlgen.Backref attribute)
backrefs (linkml.generators.sqlddlgen.SQLTable attribute)
base_dir (linkml.utils.generator.Generator attribute)
base_type (linkml.generators.sqlddlgen.SQLColumn attribute)
bbin() (linkml.generators.markdowngen.MarkdownGenerator method)
Block (class in linkml.utils.execute_tutorial)
bullet() (linkml.generators.markdowngen.MarkdownGenerator static method)
C
cardinality (linkml.generators.golrgen.GOLRField attribute)
cardinality() (linkml.generators.yumlgen.YumlGenerator static method)
category (linkml.utils.execute_tutorial.Block attribute)
check_prefix() (linkml.utils.schemaloader.SchemaLoader method)
check_prefixes() (linkml.utils.schemaloader.SchemaLoader method)
CheckResult (class in linkml.reporting.model)
class
class_ancestors() (linkml_runtime.utils.schemaview.SchemaView method)
class_associations() (linkml.generators.yumlgen.YumlGenerator method)
class_box() (linkml.generators.yumlgen.YumlGenerator method)
class_children() (linkml_runtime.utils.schemaview.SchemaView method)
class_class_curie (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.Problem attribute)
(linkml.reporting.model.ProblemSlotInapplicable attribute)
(linkml.reporting.model.ProblemSlotMissing attribute)
(linkml.reporting.model.ProblemSlotUndeclared attribute)
(linkml.reporting.model.Report attribute)
class_class_uri (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.Problem attribute)
(linkml.reporting.model.ProblemSlotInapplicable attribute)
(linkml.reporting.model.ProblemSlotMissing attribute)
(linkml.reporting.model.ProblemSlotUndeclared attribute)
(linkml.reporting.model.Report attribute)
class_descendants() (linkml_runtime.utils.schemaview.SchemaView method)
class_hier() (linkml.generators.markdowngen.MarkdownGenerator method)
class_identifier() (linkml.utils.generator.Generator method)
class_identifier_path() (linkml.utils.generator.Generator method)
class_induced_slots() (linkml_runtime.utils.schemaview.SchemaView method)
class_leaves() (linkml_runtime.utils.schemaview.SchemaView method)
class_link() (linkml.generators.markdowngen.MarkdownGenerator method)
class_model_uri (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.Problem attribute)
(linkml.reporting.model.ProblemSlotInapplicable attribute)
(linkml.reporting.model.ProblemSlotMissing attribute)
(linkml.reporting.model.ProblemSlotUndeclared attribute)
(linkml.reporting.model.Report attribute)
class_name (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.Problem attribute)
(linkml.reporting.model.ProblemSlotInapplicable attribute)
(linkml.reporting.model.ProblemSlotMissing attribute)
(linkml.reporting.model.ProblemSlotUndeclared attribute)
(linkml.reporting.model.Report attribute)
class_name_mappings() (linkml_runtime.utils.schemaview.SchemaView method)
class_or_type_for() (linkml.utils.generator.Generator method)
class_or_type_name() (linkml.utils.generator.Generator method)
class_parents() (linkml_runtime.utils.schemaview.SchemaView method)
class_reference_type() (linkml.generators.pythongen.PythonGenerator method)
class_roots() (linkml_runtime.utils.schemaview.SchemaView method)
class_slots() (linkml_runtime.utils.schemaview.SchemaView method)
class_type_link() (linkml.generators.markdowngen.MarkdownGenerator method)
ClassDefinition (class in linkml_runtime.linkml_model.meta)
classes (linkml.generators.oocodegen.OODocument attribute)
classrefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
(linkml.utils.typereferences.References attribute)
codesets (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
columns (linkml.generators.sqlddlgen.SQLTable attribute)
compile() (linkml.utils.sqlutils.SQLStore method)
compile_module() (linkml.generators.pythongen.PythonGenerator method)
compile_native() (linkml.utils.sqlutils.SQLStore method)
content (linkml.utils.execute_tutorial.Block attribute)
ContextGenerator (class in linkml.generators.jsonldcontextgen)
,
[1]
convert_range() (in module linkml.generators.infer_model)
create_documents() (linkml.generators.oocodegen.OOCodeGenerator method)
CSVDumper (class in linkml_runtime.dumpers)
CsvGenerator (class in linkml.generators.csvgen)
CSVLoader (class in linkml_runtime.loaders)
curie_for() (in module linkml.utils.ifabsent_functions)
D
DataValidator (class in linkml.utils.datavalidator)
db_exists() (linkml.utils.sqlutils.SQLStore method)
DDLEntity (class in linkml.generators.sqlddlgen)
default_curie_or_uri() (in module linkml.utils.ifabsent_functions)
default_ns_for() (in module linkml.utils.ifabsent_functions)
default_prefix() (linkml.utils.generator.Generator method)
default_uri_for() (in module linkml.utils.ifabsent_functions)
default_value (linkml.generators.oocodegen.OOField attribute)
definingslots (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
delete_class() (linkml_runtime.utils.schemaview.SchemaView method)
delete_enum() (linkml_runtime.utils.schemaview.SchemaView method)
delete_slot() (linkml_runtime.utils.schemaview.SchemaView method)
delete_subset() (linkml_runtime.utils.schemaview.SchemaView method)
delete_type() (linkml_runtime.utils.schemaview.SchemaView method)
desc_for() (linkml.generators.markdowngen.MarkdownGenerator method)
description (linkml.generators.golrgen.GOLRClass attribute)
(linkml.generators.golrgen.GOLRField attribute)
(linkml.generators.sqlddlgen.DDLEntity attribute)
dialect (linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
dir_path() (linkml.generators.markdowngen.MarkdownGenerator method)
directory (linkml.generators.projectgen.ProjectConfiguration attribute)
directory_output (linkml.generators.dotgen.DotGenerator attribute)
(linkml.generators.golrgen.GolrSchemaGenerator attribute)
(linkml.generators.markdowngen.MarkdownGenerator attribute)
(linkml.utils.generator.Generator attribute)
display_name (linkml.generators.golrgen.GOLRClass attribute)
(linkml.generators.golrgen.GOLRField attribute)
document_category (linkml.generators.golrgen.GOLRClass attribute)
domain_slots() (linkml.utils.generator.Generator method)
DotGenerator (class in linkml.generators.dotgen)
dump() (linkml.utils.sqlutils.SQLStore method)
(linkml_runtime.dumpers.CSVDumper method)
(linkml_runtime.dumpers.json_dumper.JSONDumper method)
(linkml_runtime.dumpers.JSONDumper method)
(linkml_runtime.dumpers.YAMLDumper method)
dumps() (linkml_runtime.dumpers.CSVDumper method)
(linkml_runtime.dumpers.json_dumper.JSONDumper method)
(linkml_runtime.dumpers.JSONDumper method)
(linkml_runtime.dumpers.YAMLDumper method)
E
edge() (linkml.generators.dotgen.DotGenerator method)
element_header() (linkml.generators.markdowngen.MarkdownGenerator method)
element_properties() (linkml.generators.markdowngen.MarkdownGenerator method)
ElementDefinition (class in linkml.generators.owlgen)
empty_references() (in module linkml.utils.schemasynopsis)
end_class() (linkml.generators.dotgen.DotGenerator method)
(linkml.generators.golrgen.GolrSchemaGenerator method)
(linkml.generators.graphqlgen.GraphqlGenerator method)
(linkml.generators.jsonschemagen.JsonSchemaGenerator method)
(linkml.generators.protogen.ProtoGenerator method)
(linkml.generators.shexgen.ShExGenerator method)
(linkml.generators.sqlddlgen.SQLDDLGenerator method)
(linkml.utils.generator.Generator method)
end_schema() (linkml.generators.dotgen.DotGenerator method)
(linkml.generators.jsonldcontextgen.ContextGenerator method)
(linkml.generators.jsonldgen.JSONLDGenerator method)
(linkml.generators.jsonschemagen.JsonSchemaGenerator method)
(linkml.generators.owlgen.OwlSchemaGenerator method)
(linkml.generators.prefixmapgen.PrefixGenerator method)
(linkml.generators.pythongen.PythonGenerator method)
(linkml.generators.rdfgen.RDFGenerator method)
(linkml.generators.shexgen.ShExGenerator method)
(linkml.generators.sqlddlgen.SQLDDLGenerator method)
(linkml.utils.generator.Generator method)
enum
enum_ancestors() (linkml_runtime.utils.schemaview.SchemaView method)
enum_hier() (linkml.generators.markdowngen.MarkdownGenerator method)
enum_identifier_path() (linkml.utils.generator.Generator method)
enum_link() (linkml.generators.markdowngen.MarkdownGenerator method)
enum_parents() (linkml_runtime.utils.schemaview.SchemaView method)
enumrefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
(linkml.utils.typereferences.References attribute)
ERROR (linkml.reporting.model.SeverityOptions attribute)
error (linkml.utils.execute_tutorial.Block attribute)
errors() (linkml.utils.schemasynopsis.SchemaSynopsis method)
ExcelGenerator (class in linkml.generators.excelgen)
excludes (linkml.generators.projectgen.ProjectConfiguration attribute)
execute_blocks() (in module linkml.utils.execute_tutorial)
exist_warning() (linkml.generators.markdowngen.MarkdownGenerator method)
expand_curie() (linkml_runtime.utils.schemaview.SchemaView method)
expected_fail (linkml.utils.execute_tutorial.Block attribute)
F
FATAL (linkml.reporting.model.SeverityOptions attribute)
fields (linkml.generators.golrgen.GOLRClass attribute)
(linkml.generators.oocodegen.OOClass attribute)
filtered_cls_slots() (linkml.generators.yumlgen.YumlGenerator method)
foreign_key (linkml.generators.sqlddlgen.SQLColumn attribute)
formatted_element_name() (linkml.utils.generator.Generator method)
forward_reference() (linkml.generators.pythongen.PythonGenerator method)
from_sqla() (linkml.utils.sqlutils.SQLStore method)
frontmatter() (linkml.generators.markdowngen.MarkdownGenerator method)
G
gen-excel command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--output
--useuris
--verbose
-f
-im
-o
-v
YAMLFILE
gen-graphql command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen-java command line option
--format
--generate-records
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-generate-records
--no-mergeimports
--no-metadata
--output-directory
--package
--template-file
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen-json-schema command line option
--closed
--format
--importmap
--include-range-class-descendants
--inline
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--no-range-class-descendants
--not-closed
--top-class
--useuris
--verbose
-f
-i
-im
-t
-v
YAMLFILE
gen-jsonld-context command line option
--base
--flatprefixes
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--model
--no-flatprefixes
--no-mergeimports
--no-metadata
--no-model
--no-prefixes
--prefixes
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen-markdown command line option
--classes
--dir
--format
--img
--importmap
--index-file
--log_level
--map-fields
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--noimages
--notypesdir
--noyuml
--useuris
--verbose
--warnonexist
-c
-d
-f
-i
-I
-im
-M
-v
YAMLFILE
gen-owl command line option
--add-ols-annotations
--format
--importmap
--log_level
--mergeimports
--metaclasses
--metadata
--metadata-profile
--metauris
--no-add-ols-annotations
--no-mergeimports
--no-metaclasses
--no-metadata
--no-type-objects
--ontology-iri-suffix
--output
--type-objects
--useuris
--verbose
-f
-im
-o
-v
YAMLFILE
gen-prefix-map command line option
--base
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--output
--useuris
--verbose
-f
-im
-o
-v
YAMLFILE
gen-project command line option
--config-file
--dir
--exclude
--generator-arguments
--include
--mergeimports
--no-mergeimports
-A
-C
-d
-I
-X
YAMLFILE
gen-proto command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen-pydantic command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--template_file
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen-python command line option
--classvars
--format
--genmeta
--head
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-classvars
--no-genmeta
--no-head
--no-mergeimports
--no-metadata
--no-slots
--slots
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen-shacl command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen-shex command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--output
--useuris
--verbose
-f
-im
-o
-v
YAMLFILE
gen-sparql command line option
--dir
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--useuris
--verbose
-d
-f
-im
-v
YAMLFILE
gen-sqlddl command line option
--declarative
--dialect
--direct-mapping
--format
,
[1]
--generate-classes
--importmap
,
[1]
--log_level
,
[1]
--mergeimports
,
[1]
--metadata
,
[1]
--metauris
,
[1]
--no-declarative
--no-direct-mapping
--no-generate-classes
--no-mergeimports
,
[1]
--no-metadata
,
[1]
--no-pydantic
--no-use-foreign-keys
,
[1]
--pydantic
--python-import
--sqla-file
--use-foreign-keys
,
[1]
--useuris
,
[1]
--verbose
,
[1]
-f
,
[1]
-im
,
[1]
-v
,
[1]
YAMLFILE
,
[1]
gen-sssom command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--output
--useuris
--verbose
-f
-im
-o
-v
YAMLFILE
gen-typescript command line option
--format
--importmap
--log_level
--mergeimports
--metadata
--metauris
--no-mergeimports
--no-metadata
--useuris
--verbose
-f
-im
-v
YAMLFILE
gen_class_meta() (linkml.generators.pythongen.PythonGenerator method)
gen_class_reference() (linkml.generators.pythongen.PythonGenerator static method)
gen_class_variable() (linkml.generators.pythongen.PythonGenerator method)
gen_class_variables() (linkml.generators.pythongen.PythonGenerator method)
gen_classdef() (linkml.generators.pythongen.PythonGenerator method)
gen_classdefs() (linkml.generators.pythongen.PythonGenerator method)
gen_enum() (linkml.generators.pythongen.PythonGenerator method)
gen_enum_comment() (linkml.generators.pythongen.PythonGenerator method)
gen_enum_definition() (linkml.generators.pythongen.PythonGenerator method)
gen_enum_description() (linkml.generators.pythongen.PythonGenerator method)
gen_enumerations() (linkml.generators.pythongen.PythonGenerator method)
gen_import_list() (linkml.generators.pythongen.PythonGenerator method)
gen_imports() (linkml.generators.pythongen.PythonGenerator method)
gen_inherited_slots() (linkml.generators.pythongen.PythonGenerator method)
gen_namespaces() (linkml.generators.namespacegen.NamespaceGenerator method)
(linkml.generators.pythongen.PythonGenerator method)
gen_postinit() (linkml.generators.pythongen.PythonGenerator method)
gen_postinits() (linkml.generators.pythongen.PythonGenerator method)
gen_pv_constructor() (linkml.generators.pythongen.PythonGenerator method)
gen_pvs() (linkml.generators.pythongen.PythonGenerator method)
gen_pvs2() (linkml.generators.pythongen.PythonGenerator method)
gen_pvs2_initializers() (linkml.generators.pythongen.PythonGenerator method)
gen_references() (linkml.generators.pythongen.PythonGenerator method)
gen_schema() (linkml.generators.namespacegen.NamespaceGenerator method)
(linkml.generators.pythongen.PythonGenerator method)
gen_slot() (linkml.generators.pythongen.PythonGenerator method)
gen_slotdefs() (linkml.generators.pythongen.PythonGenerator method)
gen_type_meta() (linkml.generators.pythongen.PythonGenerator method)
gen_typedefs() (linkml.generators.pythongen.PythonGenerator method)
generate() (linkml.generators.projectgen.ProjectGenerator method)
generate_ddl() (linkml.generators.sqlddlgen.SQLDDLGenerator method)
generate_enum_label() (linkml.generators.oocodegen.OOCodeGenerator method)
generate_enums() (linkml.generators.pydanticgen.PydanticGenerator method)
generate_header() (linkml.generators.csvgen.CsvGenerator method)
(linkml.generators.golrgen.GolrSchemaGenerator method)
(linkml.generators.graphqlgen.GraphqlGenerator method)
(linkml.generators.protogen.ProtoGenerator method)
(linkml.generators.shaclgen.ShaclGenerator method)
(linkml.generators.shexgen.ShExGenerator method)
(linkml.generators.sqlddlgen.SQLDDLGenerator method)
generate_sparql() (linkml.generators.sparqlgen.SparqlGenerator method)
Generator (class in linkml.utils.generator)
generator_args (linkml.generators.projectgen.ProjectConfiguration attribute)
generator_name (linkml.generators.excelgen.ExcelGenerator attribute)
generator_version (linkml.generators.excelgen.ExcelGenerator attribute)
generatorname (linkml.generators.csvgen.CsvGenerator attribute)
(linkml.generators.dotgen.DotGenerator attribute)
(linkml.generators.golrgen.GolrSchemaGenerator attribute)
(linkml.generators.graphqlgen.GraphqlGenerator attribute)
(linkml.generators.javagen.JavaGenerator attribute)
(linkml.generators.jsonldcontextgen.ContextGenerator attribute)
(linkml.generators.jsonldgen.JSONLDGenerator attribute)
(linkml.generators.jsonschemagen.JsonSchemaGenerator attribute)
(linkml.generators.markdowngen.MarkdownGenerator attribute)
(linkml.generators.namespacegen.NamespaceGenerator attribute)
(linkml.generators.owlgen.OwlSchemaGenerator attribute)
(linkml.generators.prefixmapgen.PrefixGenerator attribute)
(linkml.generators.protogen.ProtoGenerator attribute)
(linkml.generators.pydanticgen.PydanticGenerator attribute)
(linkml.generators.pythongen.PythonGenerator attribute)
(linkml.generators.rdfgen.RDFGenerator attribute)
(linkml.generators.shaclgen.ShaclGenerator attribute)
(linkml.generators.shexgen.ShExGenerator attribute)
(linkml.generators.sparqlgen.SparqlGenerator attribute)
(linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
(linkml.generators.summarygen.SummaryGenerator attribute)
(linkml.generators.yamlgen.YAMLGenerator attribute)
(linkml.generators.yumlgen.YumlGenerator attribute)
(linkml.utils.generator.Generator attribute)
generatorversion (linkml.generators.csvgen.CsvGenerator attribute)
(linkml.generators.dotgen.DotGenerator attribute)
(linkml.generators.golrgen.GolrSchemaGenerator attribute)
(linkml.generators.graphqlgen.GraphqlGenerator attribute)
(linkml.generators.javagen.JavaGenerator attribute)
(linkml.generators.jsonldcontextgen.ContextGenerator attribute)
(linkml.generators.jsonldgen.JSONLDGenerator attribute)
(linkml.generators.jsonschemagen.JsonSchemaGenerator attribute)
(linkml.generators.markdowngen.MarkdownGenerator attribute)
(linkml.generators.namespacegen.NamespaceGenerator attribute)
(linkml.generators.owlgen.OwlSchemaGenerator attribute)
(linkml.generators.prefixmapgen.PrefixGenerator attribute)
(linkml.generators.protogen.ProtoGenerator attribute)
(linkml.generators.pydanticgen.PydanticGenerator attribute)
(linkml.generators.pythongen.PythonGenerator attribute)
(linkml.generators.rdfgen.RDFGenerator attribute)
(linkml.generators.shaclgen.ShaclGenerator attribute)
(linkml.generators.shexgen.ShExGenerator attribute)
(linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
(linkml.generators.summarygen.SummaryGenerator attribute)
(linkml.generators.yamlgen.YAMLGenerator attribute)
(linkml.generators.yumlgen.YumlGenerator attribute)
(linkml.utils.generator.Generator attribute)
get_class() (linkml_runtime.utils.schemaview.SchemaView method)
get_class_isa_plus_mixins() (linkml.generators.pydanticgen.PydanticGenerator method)
get_class_name() (linkml.generators.oocodegen.OOCodeGenerator method)
get_class_slot_range() (linkml.generators.pydanticgen.PydanticGenerator method)
get_db() (in module linkml.generators.infer_model)
get_dumper() (in module linkml.utils.datautils)
get_element() (linkml_runtime.utils.schemaview.SchemaView method)
get_elements_applicable_by_identifier() (linkml_runtime.utils.schemaview.SchemaView method)
get_elements_applicable_by_prefix() (linkml_runtime.utils.schemaview.SchemaView method)
get_enum() (linkml_runtime.utils.schemaview.SchemaView method)
get_identifier_slot() (linkml_runtime.utils.schemaview.SchemaView method)
get_key_slot() (linkml_runtime.utils.schemaview.SchemaView method)
get_loader() (in module linkml.utils.datautils)
get_local_imports() (in module linkml.generators.projectgen)
get_mapping_index() (linkml_runtime.utils.schemaview.SchemaView method)
get_mappings() (linkml_runtime.utils.schemaview.SchemaView method)
get_metamodel_slot_name() (linkml.utils.generator.Generator method)
get_mixin_identifier_range() (linkml.generators.pydanticgen.PydanticGenerator method)
get_predefined_slot_values() (linkml.generators.pydanticgen.PydanticGenerator method)
get_pv_element() (in module linkml.generators.infer_model)
get_ref_for_descendants() (linkml.generators.jsonschemagen.JsonSchemaGenerator method)
get_singular_primary_key() (linkml.generators.sqlddlgen.SQLTable method)
get_slot() (linkml_runtime.utils.schemaview.SchemaView method)
get_slot_name() (linkml.generators.oocodegen.OOCodeGenerator method)
get_sql_range() (linkml.generators.sqlddlgen.SQLDDLGenerator method)
get_subset() (linkml_runtime.utils.schemaview.SchemaView method)
get_table_by_class_name() (linkml.generators.sqlddlgen.SQLSchema method)
get_type() (linkml_runtime.utils.schemaview.SchemaView method)
get_type_designator_slot() (linkml_runtime.utils.schemaview.SchemaView method)
get_uri() (linkml_runtime.utils.schemaview.SchemaView method)
GOLRClass (class in linkml.generators.golrgen)
GOLRField (class in linkml.generators.golrgen)
GolrSchemaGenerator (class in linkml.generators.golrgen)
GraphqlGenerator (class in linkml.generators.graphqlgen)
H
header() (linkml.generators.markdowngen.MarkdownGenerator method)
Hit (class in linkml.generators.infer_model)
I
id (linkml.generators.golrgen.GOLRClass attribute)
(linkml.generators.golrgen.GOLRField attribute)
id_to_url() (linkml.generators.markdowngen.MarkdownGenerator static method)
ifabsent_postinit_declaration() (in module linkml.utils.ifabsent_functions)
ifabsent_value_declaration() (in module linkml.utils.ifabsent_functions)
imports (linkml.generators.oocodegen.OODocument attribute)
imports_closure() (linkml_runtime.utils.schemaview.SchemaView method)
in_schema (linkml.generators.sqlddlgen.SQLTable attribute)
in_schema() (linkml_runtime.utils.schemaview.SchemaView method)
includes (linkml.generators.projectgen.ProjectConfiguration attribute)
induced_class() (linkml_runtime.utils.schemaview.SchemaView method)
induced_enum() (linkml_runtime.utils.schemaview.SchemaView method)
induced_slot() (linkml_runtime.utils.schemaview.SchemaView method)
induced_type() (linkml_runtime.utils.schemaview.SchemaView method)
infer_enum_meanings() (in module linkml.generators.infer_model)
infer_index_slot() (in module linkml.utils.datautils)
infer_model() (in module linkml.generators.infer_model)
infer_range() (in module linkml.generators.infer_model)
infer_root_class() (in module linkml.utils.datautils)
info (linkml.reporting.model.CheckResult attribute)
INFO (linkml.reporting.model.SeverityOptions attribute)
info (linkml.reporting.model.slots attribute)
inject_primary_keys (linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
inschema (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
instantiates (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.slots attribute)
inverse() (linkml_runtime.utils.schemaview.SchemaView method)
inverses (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
is_a (linkml.generators.oocodegen.OOClass attribute)
is_bash() (linkml.utils.execute_tutorial.Block method)
is_class_unconstrained() (linkml.utils.generator.Generator method)
is_date() (in module linkml.generators.infer_model)
is_file_block() (linkml.utils.execute_tutorial.Block method)
is_inlined() (linkml_runtime.utils.schemaview.SchemaView method)
is_key_value_class() (linkml.generators.pythongen.PythonGenerator method)
is_mixin() (linkml_runtime.utils.schemaview.SchemaView method)
is_primary_key() (linkml.generators.sqlddlgen.SQLColumn method)
is_relationship() (linkml_runtime.utils.schemaview.SchemaView method)
is_secondary_ref() (linkml.generators.markdowngen.MarkdownGenerator method)
is_singular_primary_key (linkml.generators.sqlddlgen.SQLColumn attribute)
is_slot_object_property() (linkml.generators.owlgen.OwlSchemaGenerator method)
is_stdout() (linkml.utils.execute_tutorial.Block method)
isabsent_match() (in module linkml.utils.ifabsent_functions)
isarefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
J
java_style (linkml.generators.oocodegen.OOCodeGenerator attribute)
JavaGenerator (class in linkml.generators.javagen)
,
[1]
JSONDumper (class in linkml_runtime.dumpers)
(class in linkml_runtime.dumpers.json_dumper)
JSONLDGenerator (class in linkml.generators.jsonldgen)
JSONLoader (class in linkml_runtime.loaders)
,
[1]
JsonSchemaGenerator (class in linkml.generators.jsonschemagen)
,
[1]
,
[2]
K
key_name_for() (linkml.generators.pythongen.PythonGenerator method)
L
linkml
module
linkml (linkml.generators.owlgen.MetadataProfile attribute)
linkml.generators
module
linkml.generators.csvgen
module
linkml.generators.dotgen
module
linkml.generators.excelgen
module
linkml.generators.golrgen
module
linkml.generators.graphqlgen
module
linkml.generators.infer_model
module
linkml.generators.javagen
module
linkml.generators.jsonldcontextgen
module
linkml.generators.jsonldgen
module
linkml.generators.jsonschemagen
module
linkml.generators.markdowngen
module
linkml.generators.namespacegen
module
linkml.generators.oocodegen
module
linkml.generators.owlgen
module
linkml.generators.prefixmapgen
module
linkml.generators.projectgen
module
linkml.generators.protogen
module
linkml.generators.pydanticgen
module
linkml.generators.pythongen
module
linkml.generators.rdfgen
module
linkml.generators.shaclgen
module
linkml.generators.shexgen
module
linkml.generators.sparqlgen
module
linkml.generators.sqlddlgen
module
linkml.generators.summarygen
module
linkml.generators.yamlgen
module
linkml.generators.yumlgen
module
linkml.reporting
module
linkml.reporting.model
module
linkml.utils
module
linkml.utils.converter
module
linkml.utils.datautils
module
linkml.utils.datavalidator
module
linkml.utils.execute_tutorial
module
linkml.utils.generator
module
linkml.utils.helpers
module
linkml.utils.ifabsent_functions
module
linkml.utils.mergeutils
module
linkml.utils.rawloader
module
linkml.utils.schemaloader
module
linkml.utils.schemasynopsis
module
linkml.utils.typereferences
module
linkml.utils.validation
module
list() (linkml.generators.owlgen.MetadataProfile static method)
load() (linkml.utils.sqlutils.SQLStore method)
(linkml_runtime.loaders.CSVLoader method)
(linkml_runtime.loaders.JSONLoader method)
(linkml_runtime.loaders.RDFLibLoader method)
(linkml_runtime.loaders.YAMLLoader method)
load_any() (linkml_runtime.loaders.CSVLoader method)
(linkml_runtime.loaders.JSONLoader method)
(linkml_runtime.loaders.RDFLibLoader method)
(linkml_runtime.loaders.YAMLLoader method)
load_raw_schema() (in module linkml.utils.rawloader)
loads() (linkml_runtime.loaders.CSVLoader method)
(linkml_runtime.loaders.JSONLoader method)
,
[1]
(linkml_runtime.loaders.RDFLibLoader method)
(linkml_runtime.loaders.YAMLLoader method)
loads_any() (linkml_runtime.loaders.CSVLoader method)
(linkml_runtime.loaders.JSONLoader method)
(linkml_runtime.loaders.RDFLibLoader method)
(linkml_runtime.loaders.YAMLLoader method)
logger_warning() (linkml.utils.schemaloader.SchemaLoader method)
M
make_multivalued() (linkml.generators.oocodegen.OOCodeGenerator method)
map_type() (linkml.generators.javagen.JavaGenerator method)
(linkml.generators.oocodegen.OOCodeGenerator method)
mapped_to (linkml.generators.sqlddlgen.SQLColumn attribute)
(linkml.generators.sqlddlgen.SQLSchema attribute)
(linkml.generators.sqlddlgen.SQLTable attribute)
mapped_to_alias (linkml.generators.sqlddlgen.SQLColumn attribute)
mappings() (linkml.generators.markdowngen.MarkdownGenerator method)
MarkdownGenerator (class in linkml.generators.markdowngen)
,
[1]
materialize_schema() (in module linkml.generators.sparqlgen)
merge_class() (linkml.utils.schemaloader.SchemaLoader method)
merge_classes() (in module linkml.utils.mergeutils)
merge_dicts() (in module linkml.utils.mergeutils)
merge_enum() (linkml.utils.schemaloader.SchemaLoader method)
merge_enums() (in module linkml.utils.mergeutils)
merge_imports() (linkml_runtime.utils.schemaview.SchemaView method)
merge_namespaces() (in module linkml.utils.mergeutils)
merge_schema() (linkml_runtime.utils.schemaview.SchemaView method)
merge_schemas() (in module linkml.utils.mergeutils)
merge_slot() (linkml.utils.schemaloader.SchemaLoader method)
merge_slots() (in module linkml.utils.mergeutils)
merge_type() (linkml.utils.schemaloader.SchemaLoader method)
mergeimports (linkml.generators.projectgen.ProjectConfiguration attribute)
metadata_profile (linkml.generators.owlgen.OwlSchemaGenerator attribute)
MetadataProfile (class in linkml.generators.owlgen)
metamodel_name_map (linkml.utils.generator.Generator attribute)
mixinrefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
mixins (linkml.generators.oocodegen.OOClass attribute)
(linkml.utils.schemasynopsis.SchemaSynopsis attribute)
module
linkml
linkml.generators
linkml.generators.csvgen
linkml.generators.dotgen
linkml.generators.excelgen
linkml.generators.golrgen
linkml.generators.graphqlgen
linkml.generators.infer_model
linkml.generators.javagen
linkml.generators.jsonldcontextgen
linkml.generators.jsonldgen
linkml.generators.jsonschemagen
linkml.generators.markdowngen
linkml.generators.namespacegen
linkml.generators.oocodegen
linkml.generators.owlgen
linkml.generators.prefixmapgen
linkml.generators.projectgen
linkml.generators.protogen
linkml.generators.pydanticgen
linkml.generators.pythongen
linkml.generators.rdfgen
linkml.generators.shaclgen
linkml.generators.shexgen
linkml.generators.sparqlgen
linkml.generators.sqlddlgen
linkml.generators.summarygen
linkml.generators.yamlgen
linkml.generators.yumlgen
linkml.reporting
linkml.reporting.model
linkml.utils
linkml.utils.converter
linkml.utils.datautils
linkml.utils.datavalidator
linkml.utils.execute_tutorial
linkml.utils.generator
linkml.utils.helpers
linkml.utils.ifabsent_functions
linkml.utils.mergeutils
linkml.utils.rawloader
linkml.utils.schemaloader
linkml.utils.schemasynopsis
linkml.utils.typereferences
linkml.utils.validation
mrf() (in module linkml.utils.rawloader)
N
name (linkml.generators.infer_model.Hit attribute)
(linkml.generators.oocodegen.OOClass attribute)
(linkml.generators.oocodegen.OODocument attribute)
(linkml.generators.oocodegen.OOField attribute)
(linkml.generators.sqlddlgen.SQLColumn attribute)
(linkml.generators.sqlddlgen.SQLSchema attribute)
(linkml.generators.sqlddlgen.SQLTable attribute)
(linkml.utils.typereferences.RefType attribute)
NamespaceGenerator (class in linkml.generators.namespacegen)
neighborhood() (linkml.utils.generator.Generator method)
node() (linkml.generators.dotgen.DotGenerator method)
O
obj_for() (linkml.utils.generator.Generator method)
object (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.slots attribute)
object_str (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.slots attribute)
OOClass (class in linkml.generators.oocodegen)
OOCodeGenerator (class in linkml.generators.oocodegen)
OODocument (class in linkml.generators.oocodegen)
OOField (class in linkml.generators.oocodegen)
order_by (linkml.generators.sqlddlgen.Backref attribute)
original_column (linkml.generators.sqlddlgen.Backref attribute)
output (linkml.utils.execute_tutorial.Block attribute)
OwlSchemaGenerator (class in linkml.generators.owlgen)
own_slot_names() (linkml.utils.generator.Generator method)
own_slots() (linkml.utils.generator.Generator method)
owners (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
ownslots (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
P
package (linkml.generators.oocodegen.OOClass attribute)
(linkml.generators.oocodegen.OOCodeGenerator attribute)
(linkml.generators.oocodegen.OODocument attribute)
para() (linkml.generators.markdowngen.MarkdownGenerator static method)
parent() (linkml.utils.generator.Generator method)
parse_file_to_blocks() (in module linkml.utils.execute_tutorial)
pred_hier() (linkml.generators.markdowngen.MarkdownGenerator method)
predicate (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.slots attribute)
predicate_cardinality() (linkml.generators.markdowngen.MarkdownGenerator static method)
PrefixGenerator (class in linkml.generators.prefixmapgen)
primary_keys (linkml.generators.sqlddlgen.SQLTable attribute)
primary_keys_for() (linkml.generators.pythongen.PythonGenerator method)
prior_lines (linkml.utils.execute_tutorial.Block attribute)
Problem (class in linkml.reporting.model)
ProblemSlotInapplicable (class in linkml.reporting.model)
ProblemSlotMissing (class in linkml.reporting.model)
ProblemSlotUndeclared (class in linkml.reporting.model)
process_slot_usage_definitions() (linkml.utils.schemaloader.SchemaLoader method)
process_slot_usages() (linkml.utils.schemaloader.SchemaLoader method)
ProjectConfiguration (class in linkml.generators.projectgen)
ProjectGenerator (class in linkml.generators.projectgen)
,
[1]
prop_modifier() (linkml.generators.yumlgen.YumlGenerator method)
property (linkml.generators.golrgen.GOLRField attribute)
ProtoGenerator (class in linkml.generators.protogen)
,
[1]
PydanticGenerator (class in linkml.generators.pydanticgen)
,
[1]
python_uri_for() (linkml.generators.pythongen.PythonGenerator method)
PythonGenerator (class in linkml.generators.pythongen)
,
[1]
R
raise_value_error() (linkml.utils.schemaloader.SchemaLoader static method)
raise_value_errors() (linkml.utils.schemaloader.SchemaLoader static method)
range (linkml.generators.oocodegen.OOField attribute)
range_cardinality() (linkml.generators.markdowngen.MarkdownGenerator static method)
(linkml.generators.pythongen.PythonGenerator method)
range_type_name() (linkml.generators.pythongen.PythonGenerator method)
range_type_path() (linkml.utils.generator.Generator method)
rangerefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
RDFGenerator (class in linkml.generators.rdfgen)
RDFLibLoader (class in linkml_runtime.loaders)
rdfs (linkml.generators.owlgen.MetadataProfile attribute)
referenced_by (linkml.generators.sqlddlgen.SQLTable attribute)
References (class in linkml.utils.typereferences)
RefType (class in linkml.utils.typereferences)
remove_column() (linkml.generators.sqlddlgen.SQLTable method)
remove_duplicates() (in module linkml.utils.helpers)
replace_invalid_identifier_character() (linkml.generators.oocodegen.OOCodeGenerator method)
Report (class in linkml.reporting.model)
report__results (linkml.reporting.model.slots attribute)
resolve() (linkml.utils.schemaloader.SchemaLoader method)
results (linkml.reporting.model.Report attribute)
roots (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
S
schema (linkml.utils.datavalidator.DataValidator attribute)
(linkml.utils.schemasynopsis.SchemaSynopsis attribute)
schema_errors() (linkml.utils.schemaloader.SchemaLoader method)
schema_generating (linkml.generators.golrgen.GOLRClass attribute)
SchemaDefinition (class in linkml_runtime.linkml_model.meta)
SchemaLoader (class in linkml.utils.schemaloader)
SchemaSynopsis (class in linkml.utils.schemasynopsis)
SchemaView (class in linkml_runtime.utils.schemaview)
,
[1]
score (linkml.generators.infer_model.Hit attribute)
serialize() (linkml.generators.javagen.JavaGenerator method)
,
[1]
(linkml.generators.jsonldcontextgen.ContextGenerator method)
(linkml.generators.jsonschemagen.JsonSchemaGenerator method)
,
[1]
(linkml.generators.markdowngen.MarkdownGenerator method)
(linkml.generators.oocodegen.OOCodeGenerator method)
(linkml.generators.protogen.ProtoGenerator method)
(linkml.generators.pydanticgen.PydanticGenerator method)
,
[1]
(linkml.generators.pythongen.PythonGenerator method)
(linkml.generators.shaclgen.ShaclGenerator method)
,
[1]
(linkml.generators.sparqlgen.SparqlGenerator method)
,
[1]
(linkml.generators.sqlalchemygen.SQLAlchemyGenerator method)
(linkml.generators.yamlgen.YAMLGenerator method)
,
[1]
(linkml.utils.generator.Generator method)
set_from_schema() (in module linkml.utils.mergeutils)
severity (linkml.reporting.model.slots attribute)
SeverityOptions (class in linkml.reporting.model)
ShaclGenerator (class in linkml.generators.shaclgen)
,
[1]
shared_arguments() (in module linkml.utils.generator)
sheet_name_cols (linkml.generators.excelgen.ExcelGenerator attribute)
ShExGenerator (class in linkml.generators.shexgen)
slot
slot_ancestors() (linkml_runtime.utils.schemaview.SchemaView method)
slot_applicable_range_elements() (linkml_runtime.utils.schemaview.SchemaView method)
slot_children() (linkml_runtime.utils.schemaview.SchemaView method)
slot_definition_for() (linkml.utils.schemaloader.SchemaLoader method)
slot_descendants() (linkml_runtime.utils.schemaview.SchemaView method)
slot_field() (linkml.generators.markdowngen.MarkdownGenerator method)
slot_for() (linkml.utils.generator.Generator method)
slot_leaves() (linkml_runtime.utils.schemaview.SchemaView method)
slot_link() (linkml.generators.markdowngen.MarkdownGenerator method)
slot_name() (linkml.utils.generator.Generator method)
slot_name_for() (linkml.utils.schemaloader.SchemaLoader static method)
slot_name_mappings() (linkml_runtime.utils.schemaview.SchemaView method)
slot_owl_type() (linkml.generators.owlgen.OwlSchemaGenerator method)
slot_parents() (linkml_runtime.utils.schemaview.SchemaView method)
slot_range_as_union() (linkml_runtime.utils.schemaview.SchemaView method)
slot_range_path() (linkml.utils.generator.Generator method)
slot_roots() (linkml_runtime.utils.schemaview.SchemaView method)
slot_usage_name() (in module linkml.utils.mergeutils)
slotclasses (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
SlotDefinition (class in linkml_runtime.linkml_model.meta)
slotrefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
(linkml.utils.typereferences.References attribute)
slots (class in linkml.reporting.model)
slotusages (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
sort_class_slots (linkml.utils.generator.Generator attribute)
sort_classes() (linkml.generators.pydanticgen.PydanticGenerator method)
source (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.slots attribute)
source_class (linkml.generators.oocodegen.OOClass attribute)
source_schema (linkml.generators.oocodegen.OODocument attribute)
source_slot (linkml.generators.oocodegen.OOField attribute)
SparqlGenerator (class in linkml.generators.sparqlgen)
,
[1]
split_sparql() (linkml.generators.sparqlgen.SparqlGenerator method)
SQLAlchemyGenerator (class in linkml.generators.sqlalchemygen)
SQLColumn (class in linkml.generators.sqlddlgen)
SQLDDLGenerator (class in linkml.generators.sqlddlgen)
SQLSchema (class in linkml.generators.sqlddlgen)
sqlschema (linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
SQLStore (class in linkml.utils.sqlutils)
SQLTable (class in linkml.generators.sqlddlgen)
strval() (in module linkml.utils.ifabsent_functions)
subject (linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.slots attribute)
subset_for() (linkml.utils.generator.Generator method)
subset_link() (linkml.generators.markdowngen.MarkdownGenerator method)
subset_name() (linkml.utils.generator.Generator method)
subsetrefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
(linkml.utils.typereferences.References attribute)
summarize_class_definition() (linkml.utils.schemasynopsis.SchemaSynopsis method)
summarize_definition() (linkml.utils.schemasynopsis.SchemaSynopsis method)
summarize_element() (linkml.utils.schemasynopsis.SchemaSynopsis method)
summarize_enum_definition() (linkml.utils.schemasynopsis.SchemaSynopsis method)
summarize_slot_definition() (linkml.utils.schemasynopsis.SchemaSynopsis method)
summarize_type_definition() (linkml.utils.schemasynopsis.SchemaSynopsis method)
summary() (linkml.utils.schemasynopsis.SchemaSynopsis method)
SummaryGenerator (class in linkml.generators.summarygen)
T
table (linkml.generators.sqlddlgen.SQLColumn attribute)
tables (linkml.generators.sqlddlgen.SQLSchema attribute)
term_id (linkml.generators.infer_model.Hit attribute)
title (linkml.utils.execute_tutorial.Block attribute)
to_sqla() (linkml.utils.sqlutils.SQLStore method)
to_uri() (linkml.generators.markdowngen.MarkdownGenerator method)
type
(linkml.reporting.model.CheckResult attribute)
(linkml.reporting.model.slots attribute)
type_ancestors() (linkml_runtime.utils.schemaview.SchemaView method)
type_link() (linkml.generators.markdowngen.MarkdownGenerator method)
type_parents() (linkml_runtime.utils.schemaview.SchemaView method)
typebases (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
typeofs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
typerefs (linkml.utils.schemasynopsis.SchemaSynopsis attribute)
(linkml.utils.typereferences.References attribute)
U
update() (linkml.utils.typereferences.References method)
uri_for() (in module linkml.utils.ifabsent_functions)
usage_index() (linkml_runtime.utils.schemaview.SchemaView method)
use_inherits (linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
V
valid_formats (linkml.generators.csvgen.CsvGenerator attribute)
(linkml.generators.dotgen.DotGenerator attribute)
(linkml.generators.excelgen.ExcelGenerator attribute)
(linkml.generators.golrgen.GolrSchemaGenerator attribute)
(linkml.generators.graphqlgen.GraphqlGenerator attribute)
(linkml.generators.javagen.JavaGenerator attribute)
(linkml.generators.jsonldcontextgen.ContextGenerator attribute)
(linkml.generators.jsonldgen.JSONLDGenerator attribute)
(linkml.generators.jsonschemagen.JsonSchemaGenerator attribute)
(linkml.generators.markdowngen.MarkdownGenerator attribute)
(linkml.generators.namespacegen.NamespaceGenerator attribute)
(linkml.generators.owlgen.OwlSchemaGenerator attribute)
(linkml.generators.prefixmapgen.PrefixGenerator attribute)
(linkml.generators.protogen.ProtoGenerator attribute)
(linkml.generators.pydanticgen.PydanticGenerator attribute)
(linkml.generators.pythongen.PythonGenerator attribute)
(linkml.generators.rdfgen.RDFGenerator attribute)
(linkml.generators.shaclgen.ShaclGenerator attribute)
(linkml.generators.shexgen.ShExGenerator attribute)
(linkml.generators.sparqlgen.SparqlGenerator attribute)
(linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
(linkml.generators.summarygen.SummaryGenerator attribute)
(linkml.generators.yamlgen.YAMLGenerator attribute)
(linkml.generators.yumlgen.YumlGenerator attribute)
(linkml.utils.generator.Generator attribute)
validate_item_names() (linkml.utils.schemaloader.SchemaLoader method)
validate_object() (in module linkml.utils.validation)
visit_all_class_slots (linkml.generators.dotgen.DotGenerator attribute)
(linkml.generators.golrgen.GolrSchemaGenerator attribute)
(linkml.generators.graphqlgen.GraphqlGenerator attribute)
(linkml.generators.javagen.JavaGenerator attribute)
(linkml.generators.jsonldcontextgen.ContextGenerator attribute)
(linkml.generators.jsonschemagen.JsonSchemaGenerator attribute)
(linkml.generators.markdowngen.MarkdownGenerator attribute)
(linkml.generators.namespacegen.NamespaceGenerator attribute)
(linkml.generators.prefixmapgen.PrefixGenerator attribute)
(linkml.generators.protogen.ProtoGenerator attribute)
(linkml.generators.pydanticgen.PydanticGenerator attribute)
(linkml.generators.pythongen.PythonGenerator attribute)
(linkml.generators.rdfgen.RDFGenerator attribute)
(linkml.generators.shaclgen.ShaclGenerator attribute)
(linkml.generators.shexgen.ShExGenerator attribute)
(linkml.generators.sparqlgen.SparqlGenerator attribute)
(linkml.generators.sqlddlgen.SQLDDLGenerator attribute)
(linkml.generators.yumlgen.YumlGenerator attribute)
(linkml.utils.generator.Generator attribute)
visit_class() (linkml.generators.csvgen.CsvGenerator method)
(linkml.generators.dotgen.DotGenerator method)
(linkml.generators.excelgen.ExcelGenerator method)
(linkml.generators.golrgen.GolrSchemaGenerator method)
(linkml.generators.graphqlgen.GraphqlGenerator method)
(linkml.generators.jsonldcontextgen.ContextGenerator method)
(linkml.generators.jsonldgen.JSONLDGenerator method)
(linkml.generators.jsonschemagen.JsonSchemaGenerator method)
(linkml.generators.markdowngen.MarkdownGenerator method)
(linkml.generators.owlgen.OwlSchemaGenerator method)
(linkml.generators.prefixmapgen.PrefixGenerator method)
(linkml.generators.protogen.ProtoGenerator method)
(linkml.generators.pythongen.PythonGenerator method)
(linkml.generators.shexgen.ShExGenerator method)
(linkml.generators.sqlddlgen.SQLDDLGenerator method)
(linkml.generators.summarygen.SummaryGenerator method)
(linkml.utils.generator.Generator method)
visit_class_slot() (linkml.generators.dotgen.DotGenerator method)
(linkml.generators.excelgen.ExcelGenerator method)
(linkml.generators.golrgen.GolrSchemaGenerator method)
(linkml.generators.graphqlgen.GraphqlGenerator method)
(linkml.generators.jsonschemagen.JsonSchemaGenerator method)
(linkml.generators.protogen.ProtoGenerator method)
(linkml.generators.shexgen.ShExGenerator method)
(linkml.generators.sqlddlgen.SQLDDLGenerator method)
(linkml.generators.summarygen.SummaryGenerator method)
(linkml.utils.generator.Generator method)
visit_enum() (linkml.generators.excelgen.ExcelGenerator method)
(linkml.generators.jsonschemagen.JsonSchemaGenerator method)
(linkml.generators.markdowngen.MarkdownGenerator method)
(linkml.generators.owlgen.OwlSchemaGenerator method)
(linkml.utils.generator.Generator method)
visit_schema() (linkml.generators.csvgen.CsvGenerator method)
(linkml.generators.dotgen.DotGenerator method)
(linkml.generators.golrgen.GolrSchemaGenerator method)
(linkml.generators.jsonldcontextgen.ContextGenerator method)
(linkml.generators.jsonschemagen.JsonSchemaGenerator method)
(linkml.generators.markdowngen.MarkdownGenerator method)
(linkml.generators.owlgen.OwlSchemaGenerator method)
(linkml.generators.prefixmapgen.PrefixGenerator method)
(linkml.generators.pythongen.PythonGenerator method)
(linkml.generators.shexgen.ShExGenerator method)
(linkml.generators.summarygen.SummaryGenerator method)
(linkml.generators.yumlgen.YumlGenerator method)
(linkml.utils.generator.Generator method)
visit_slot() (linkml.generators.jsonldcontextgen.ContextGenerator method)
(linkml.generators.jsonldgen.JSONLDGenerator method)
(linkml.generators.markdowngen.MarkdownGenerator method)
(linkml.generators.owlgen.OwlSchemaGenerator method)
(linkml.generators.prefixmapgen.PrefixGenerator method)
(linkml.generators.pythongen.PythonGenerator method)
(linkml.utils.generator.Generator method)
visit_subset() (linkml.generators.jsonldgen.JSONLDGenerator method)
(linkml.generators.markdowngen.MarkdownGenerator method)
(linkml.utils.generator.Generator method)
visit_type() (linkml.generators.jsonldgen.JSONLDGenerator method)
(linkml.generators.markdowngen.MarkdownGenerator method)
(linkml.generators.owlgen.OwlSchemaGenerator method)
(linkml.generators.pythongen.PythonGenerator method)
(linkml.utils.generator.Generator method)
visits_are_sorted (linkml.generators.owlgen.OwlSchemaGenerator attribute)
(linkml.utils.generator.Generator attribute)
W
WARNING (linkml.reporting.model.SeverityOptions attribute)
weight (linkml.generators.golrgen.GOLRClass attribute)
write_lines() (in module linkml.utils.execute_tutorial)
write_sqla_python_imperative() (linkml.generators.sqlddlgen.SQLDDLGenerator method)
write_to_file() (in module linkml.utils.helpers)
X
xlink() (linkml.generators.markdowngen.MarkdownGenerator method)
Y
YAMLDumper (class in linkml_runtime.dumpers)
YAMLFILE
gen-excel command line option
gen-graphql command line option
gen-java command line option
gen-json-schema command line option
gen-jsonld-context command line option
gen-markdown command line option
gen-owl command line option
gen-prefix-map command line option
gen-project command line option
gen-proto command line option
gen-pydantic command line option
gen-python command line option
gen-shacl command line option
gen-shex command line option
gen-sparql command line option
gen-sqlddl command line option
,
[1]
gen-sssom command line option
gen-typescript command line option
YAMLGenerator (class in linkml.generators.yamlgen)
,
[1]
YAMLLoader (class in linkml_runtime.loaders)
YumlGenerator (class in linkml.generators.yumlgen)